rem stringlengths 1 226k | add stringlengths 0 227k | context stringlengths 6 326k | meta stringlengths 143 403 | input_ids listlengths 256 256 | attention_mask listlengths 256 256 | labels listlengths 128 128 |
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public static Throwable getRootParentException(Throwable t) { | public static Throwable getRootParentException(Throwable t) { | public static Throwable getRootParentException(Throwable t) { Throwable cause = t; Throwable parent = t; while (cause != null) { if (cause.getCause() == null) { return parent; } parent = cause; cause = cause.getCause(); } ... | 28323 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28323/a786dc853ae4b3a64d08cfad2884587503d35d09/ExceptionHelper.java/buggy/src/java/org/mule/config/ExceptionHelper.java | [
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throw x; } | throw x; } | public void fatalError(SAXParseException x) throws SAXException { // Debug.err(x.toString()); throw x; } | 7476 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7476/01f8aec31f0d408a977de26cc5f242ec8ba1e32f/CallerList.java/buggy/jfritz/src/de/moonflower/jfritz/callerlist/CallerList.java | [
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if (value == null) { | if (value == null) { | public Object get() { Thread currentThread = Thread.currentThread(); // Note that we don't have to synchronize, as only this thread will // ever modify the returned value. Object value = valueMap.get(currentThread); if (value == null) { value = initialValue(); valueMap.put(currentThread, value == null ? NULL ... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/b2ed890086e708f00d163f3e8514bfa8b353f662/ThreadLocal.java/buggy/core/src/classpath/java/java/lang/ThreadLocal.java | [
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this.persist = hibernateSession.getMethod("persist", new Class[]{Object.class}); | this.persist = hibernateSession.getMethod("persist", new Class[]{String.class,Object.class}); | public HibernateRichObjectBuilder(Object session) { super(); // call the normal rich object builder first try { // Lazy load the Session class from Hibernate. Class hibernateSession = Class.forName("org.hibernate.Session"); // Test to see if our parameter is really a S... | 50115 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50115/19351f078278fa928ff9bc18f85c51a99eec3c28/HibernateRichObjectBuilder.java/clean/src/org/biojavax/bio/db/HibernateRichObjectBuilder.java | [
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final long lvalue = Double.doubleToLongBits(value); final int lsbv = (int) (lvalue & 0xFFFFFFFFL); final int msbv = (int) ((lvalue >>> 32) & 0xFFFFFFFFL); os.writePUSH(msbv); os.writePUSH(lsbv); } | final long lvalue = Double.doubleToLongBits(value); final int lsbv = (int) (lvalue & 0xFFFFFFFFL); final int msbv = (int) ((lvalue >>> 32) & 0xFFFFFFFFL); os.writePUSH(msbv); os.writePUSH(lsbv); } | protected final void pushConstant(EmitterContext ec, AbstractX86Stream os) { final long lvalue = Double.doubleToLongBits(value); final int lsbv = (int) (lvalue & 0xFFFFFFFFL); final int msbv = (int) ((lvalue >>> 32) & 0xFFFFFFFFL); os.writePUSH(msbv); os.writePUSH(lsbv); } | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/55b12818040bb69b51502c4cd0f42118d2046977/DoubleItem.java/clean/core/src/core/org/jnode/vm/x86/compiler/l1a/DoubleItem.java | [
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result= fFragments[i].getFile(path); | result= fFragments[i].getFile(location); | public IIndexFile getFile(IPath location) throws CoreException { IIndexFile result= null; String path= location.toOSString(); for (int i = 0; result==null && i < fPrimaryFragmentCount; i++) { result= fFragments[i].getFile(path); } return result; } | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/d6d9ed6df05fa9a4d5efa12e7ef50e6fa2caec66/CIndex.java/buggy/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/index/CIndex.java | [
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handle.addDisposeListener(disposeLitener); | if (handle != null) { handle.addDisposeListener(disposeLitener); } | public ReportMediator getMediator( ModuleHandle handle ) { handle.addDisposeListener(disposeLitener); ReportMediator mediator = (ReportMediator) mediatorMap.get( handle ); if ( mediator == null ) { mediator = new ReportMediator( ); mediatorMap.put( handle, mediator ); } return mediator; } | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/b97243816b5e6a0657e44d3f9ed52189a65aaf65/SessionHandleAdapter.java/buggy/UI/org.eclipse.birt.report.designer.core/src/org/eclipse/birt/report/designer/core/model/SessionHandleAdapter.java | [
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if (lookaheadType instanceof X10ParsedClassType) c = ((X10Context) c).pushDepType((X10ParsedClassType) lookaheadType); | if (lookaheadType instanceof X10NamedType) c = ((X10Context) c).pushDepType((X10NamedType) lookaheadType); | public Context enterChildScope(Node child, Context c) { if (child == this.dep) { TypeSystem ts = c.typeSystem(); if (lookaheadType instanceof X10ParsedClassType) c = ((X10Context) c).pushDepType((X10ParsedClassType) lookaheadType); } Context cc = super.enterChil... | 1769 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1769/0fa62f634e354c0b852779d3823c83e336744505/X10AmbTypeNode_c.java/buggy/x10.compiler/src/polyglot/ext/x10/ast/X10AmbTypeNode_c.java | [
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return _output; | return output; | public org.apache.geronimo.interop.rmi.iiop.ObjectOutputStream getOutputStream() { if (SIMPLE_IDL) { return getSimpleOutputStream(); } if (_output == null) { _output = org.apache.geronimo.interop.rmi.iiop.ObjectOutputStream.getInstance(_parameters); } return ... | 12474 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12474/9d2c39c906c6955e17daf4ac239b85d4727ddc83/Connection.java/clean/modules/interop/src/java/org/apache/geronimo/interop/rmi/iiop/client/Connection.java | [
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dirtyScreen.setBounds(0,lenScreen - 1,0,0); updateDirty(); | dirtyScreen.setBounds(0, lenScreen - 1, 0, 0); updateDirty(); | protected void restoreScreen() { lastAttr = 32; dirtyScreen.setBounds(0,lenScreen - 1,0,0); updateDirty(); } | 1179 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1179/d3f4f0d032e4305c6a78bdb863ee5599f3e41633/Screen5250.java/clean/tn5250j/src/org/tn5250j/framework/tn5250/Screen5250.java | [
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String prefix = name + ".resource.loader."; | String prefix = name+".resource.loader."; | public void configure(Configuration configuration) throws ConfigurationException { this.resolverContext = new DefaultContext(); this.objectExports = new ArrayList(); this.tmplEngine = new VelocityEngine(); this.tmplEngine.setProperty(Velocity.RUNTIME_LOG_LOGSYSTEM, this); // First... | 46428 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46428/1937c1aabe48ce0e24cc3ac7579b71da181d7f08/VelocityGenerator.java/buggy/src/blocks/velocity/java/org/apache/cocoon/generation/VelocityGenerator.java | [
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if(_children[i] instanceof PPDrawing) { | else if(_children[i] instanceof PPDrawing) { | protected Slide(byte[] source, int start, int len) { // Grab the header _header = new byte[8]; System.arraycopy(source,start,_header,0,8); // Find our children _children = Record.findChildRecords(source,start+8,len-8); // Find the interesting ones in there for(int i=0; i<_children.length; i++) { if(_children[... | 509 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/509/aebf3c2b527446233a6ee5c1a765a28a71be0204/Slide.java/clean/src/scratchpad/src/org/apache/poi/hslf/record/Slide.java | [
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table2dc.put("ItemsByTitle", item.getDC("title", null, Item.ANY)); table2dc.put("ItemsByAuthor", item.getDC("contributor", Item.ANY, Item.ANY)); table2dc.put("ItemsByDate", item.getDC("date", "issued", Item.ANY)); | table2dc.put("ItemsByTitle", titleArray); table2dc.put("ItemsByAuthor", authorArray); table2dc.put("ItemsByDate", dateArray); | public static void itemAdded(Context context, Item item) throws SQLException { // add all parent communities to communities2item table Community[] parents = item.getCommunities(); for (int j = 0; j < parents.length; j++) { TableRow row = DatabaseManager.create(co... | 47214 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47214/1347532740ce2bff5dc4b7cc1065c218dc342bc9/Browse.java/buggy/dspace/src/org/dspace/browse/Browse.java | [
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builder1.setPeerPublicValue(pub2); | try { builder2.setPeerPublicValue(pub1); builder1.setPeerPublicValue(pub2); } catch (DHSessionKeyBuilder.InvalidPublicParameterException ippe) { assertTrue(ippe.getMessage(), true); } | public void testDHSessionKeyBuilder(){ I2PAppContext ctx = new I2PAppContext(); for (int i = 0; i < 5; i++) { DHSessionKeyBuilder builder1 = new DHSessionKeyBuilder(); DHSessionKeyBuilder builder2 = new DHSessionKeyBuilder(); BigInteger pub1 = builder1.getMyPublicValue... | 3808 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3808/a8a866b5f60e9319f293bda8dd9c6b52ae5b4db2/DHSessionKeyBuilderTest.java/clean/core/java/test/net/i2p/crypto/DHSessionKeyBuilderTest.java | [
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SimpleDateFormat df = new SimpleDateFormat("''yyyy-MM-dd''"); set(parameterIndex, df.format(x)); | set(parameterIndex, DF1.format(x)); | public void setDate(int parameterIndex, java.sql.Date x) throws SQLException { SimpleDateFormat df = new SimpleDateFormat("''yyyy-MM-dd''"); set(parameterIndex, df.format(x)); // The above is how the date should be handled. // // However, in JDK's prior to 1.1.6 (confirmed with the // Linux jdk1.1.3 ... | 45454 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45454/475c1452b1f8f52a791fcea40be4b7f971afefeb/PreparedStatement.java/buggy/src/interfaces/jdbc/org/postgresql/jdbc2/PreparedStatement.java | [
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this.info.setSubcriptionName(name); | this.info.setSubscriptionName(name); | public ActiveMQMessageConsumer(ActiveMQSession session, ConsumerId consumerId, ActiveMQDestination dest, String name, String selector, int prefetch, int maximumPendingMessageCount, boolean noLocal, boolean browser, boolean dispatchAsync) throws JMSException { if (dest == null) { ... | 17032 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17032/333158a031fe2265f0277ddd4e45b4d364233c1c/ActiveMQMessageConsumer.java/buggy/activemq-core/src/main/java/org/apache/activemq/ActiveMQMessageConsumer.java | [
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if (lastDot != -1 && lastDot > lastSlash) { shortName = entryname.substring(lastSlash + 1, lastDot); } else { shortName = entryname.substring(lastSlash + 1); } | shortName = entryname.substring(lastSlash + 1); name = new StringBuffer(repository.getName()).append('/') .append(shortName).toString(); | protected ZipResource(File zipfile, ZipEntry zipentry, ZipRepository repository) { this.zipentry = zipentry; this.zipfile = zipfile; this.repository = repository; String entryname = zipentry.getName(); int lastDot = entryname.lastIndexOf('.'); int lastSlash = entryname.last... | 46029 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46029/14f8f1e8d2c21a87bdb4799b55d5a75217ceab84/ZipResource.java/clean/src/helma/framework/repository/ZipResource.java | [
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public void fillPolygon(int[] xPoints, int[] yPoints, int nPoints) | public void fillPolygon (int[] xPoints, int[] yPoints, int nPoints) | public void fillPolygon(int[] xPoints, int[] yPoints, int nPoints) { if ((tx == 0) || (ty == 0)) { directGfx.fillPolygon(xPoints, yPoints, nPoints); return; } throw new UnsupportedOperationException("translate not implemented"); } | 5916 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5916/b1ca781a0ecf73b7d921dd831bd5e2273992cfe6/IntegerGraphicsState.java/buggy/libjava/gnu/awt/j2d/IntegerGraphicsState.java | [
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g.fillRect(0,0,getSize().width,getSize().height); | g.fillRect(0,0,s.width,s.height); | public void paint(Graphics g) { g.setColor(Color.gray); g.fillRect(0,0,getSize().width,getSize().height); if(image!=null) g.drawImage(image,0,0,this); } | 46409 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46409/03ab5f01740a7c2c3fe570d5253aa9bd039d0c70/ImageViewer.java/clean/src/interfaces/jdbc/example/ImageViewer.java | [
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assertNotNull(fPer.getLabel()); | for (int i = 0; i < fPerspectives.length; i++) { String label = fPerspectives[i].getLabel(); assertNotNull(label); assertTrue(label.length() > 0); } | public void testGetLabel() { assertNotNull(fPer.getLabel()); } | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/23646e3d0641502fabd284517ff74fd17e085f16/IPerspectiveDescriptorTest.java/clean/tests/org.eclipse.ui.tests/Eclipse UI Tests/org/eclipse/ui/tests/api/IPerspectiveDescriptorTest.java | [
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if (m_priors[i] > 0) { m_modelNormal[i][j][0] /= m_priors[i]; | if (weights[i][j] > 0) { m_modelNormal[i][j][0] /= weights[i][j]; | public void buildClusterer(Instances data) throws Exception { m_theInstances = new Instances(data, 0); if (m_wrappedClusterer == null) { throw new Exception("No clusterer has been set"); } m_wrappedClusterer.buildClusterer(data); m_model = new DiscreteEstimator[m_wrappedClusterer.numberOfCl... | 6866 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6866/275dea1dbb492cbdd8c47e5430d3fb38ba291cac/MakeDensityBasedClusterer.java/clean/clusterers/MakeDensityBasedClusterer.java | [
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addImpl(comp, constraints, -1); | addImpl(comp, null, -1); return comp; | public void add(Component comp, Object constraints) { addImpl(comp, constraints, -1); } | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/0e5ba93f67f359dbdb3b61f9a098e2718a744e71/Container.java/buggy/core/src/classpath/java/java/awt/Container.java | [
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public static void stringToSAX(String xml, String systemId, ContentHandler contentHandler, boolean validating) { readerToSAX(new StringReader(xml), systemId, contentHandler, validating); | public static void stringToSAX(String xml, String systemId, ContentHandler contentHandler, boolean validating, boolean handleXInclude) { readerToSAX(new StringReader(xml), systemId, contentHandler, validating, handleXInclude); | public static void stringToSAX(String xml, String systemId, ContentHandler contentHandler, boolean validating) { readerToSAX(new StringReader(xml), systemId, contentHandler, validating); } | 51410 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51410/c92faea3770d68e915964a3102a4873b3279f0cd/XMLUtils.java/clean/src/java/org/orbeon/oxf/xml/XMLUtils.java | [
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temp = children.item(0); text = new TextImpl(temp.getNodeValue()); | if (children.getLength() != 0) { temp = children.item(0); text = new TextImpl(temp.getNodeValue()); } else { result = 1; text = new TextImpl(""); } | public long process() throws PermissionDeniedException, EXistException, XPathException { NodeImpl[] qr = select(docs); NodeList children = content.getChildNodes(); if (qr == null || children.getLength() == 0) return 0; IndexListener listener = new IndexListener(qr); NodeImpl node; Node temp; TextImpl text; A... | 2909 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2909/d31ac0d651739cc32d55579c14a0786f6bfb4200/Update.java/buggy/src/org/exist/xupdate/Update.java | [
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result.append((char) ((s & 0xff00) >> 8)).append((char) (s & 0xff)); } | result.append((char) ((s & 0xff00) >> 8)).append((char) (s & 0xff)); } | private static void encodeShortBigEndian(StringBuffer result, int s) { result.append((char) ((s & 0xff00) >> 8)).append((char) (s & 0xff)); } | 46770 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46770/415b1e0db282c02d672a7e34a34a2bea0f69ccb2/Pack.java/buggy/src/org/jruby/util/Pack.java | [
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if ( fromLabel.equals("") || fromLabel == null ) { | if (fromLabel.equals("") || fromLabel == null) { | public void setFromLabel(String fromLabel) { if ( fromLabel.equals("") || fromLabel == null ) { m_FromLabel = null; } else { m_FromLabel = fromLabel; } } | 639 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/639/6154080061f869b4e425d608da3bd61fad967564/MSVSSHISTORY.java/buggy/src/main/org/apache/tools/ant/taskdefs/optional/vss/MSVSSHISTORY.java | [
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int attDefIndex = getAttDef(element, fTempQName); | int attDefIndex = getAttDefByElementIndex(elementIndex, fTempQName); | private void validateElementAndAttributes(QName element, XMLAttrList attrList) throws Exception { if (fGrammar == null && !fValidating && !fNamespacesEnabled) { fCurrentElementIndex = -1; fCurrentContentSpecType = -1; ... | 6373 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6373/ff1645292b3c3abd184d78545aa9f14f66839381/XMLValidator.java/clean/src/org/apache/xerces/validators/common/XMLValidator.java | [
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if (jj_scan_token(CLASS)) return true; if (jj_la == 0 && jj_scanpos == jj_lastpos) return false; if (jj_scan_token(IDENTIFIER)) return true; if (jj_la == 0 && jj_scanpos == jj_lastpos) return false; | if (jj_3R_177()) return true; | final private boolean jj_3R_162() { if (jj_scan_token(CLASS)) return true; if (jj_la == 0 && jj_scanpos == jj_lastpos) return false; if (jj_scan_token(IDENTIFIER)) return true; if (jj_la == 0 && jj_scanpos == jj_lastpos) return false; Token xsp; xsp = jj_scanpos; if (jj_3R_308()) jj_scanpos = xsp... | 45569 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45569/d42ce7980bc2030e88ae13be5cf1b864eee291da/JavaParser.java/clean/pmd/src/net/sourceforge/pmd/ast/JavaParser.java | [
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inlineMixinMembers(mixin.nextInfo().members(), impl); | inlineMixinMembers(mixin.nextInfo().members(), impl, vparams.length); | public void inlineMixin(int i, Type type, Symbol iface, Template impl) { assert 0 < i && i < state : "state = " + state + ", i = " + i; switch (parents[i]) { case TypeRef(Type prefix, Symbol mixin, Type[] args): map.insertSymbol(mixin, clasz); cloner.owners.put(mixin.prima... | 5590 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5590/5c6fdd942fe5b48a2675950354b9d7c22b09cb39/ExpandMixins.java/clean/sources/scalac/transformer/ExpandMixins.java | [
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int documentOffset, PyCodeCompletion codeCompletion){ | String activationToken, int documentOffset, int qlen, PyCodeCompletion codeCompletion, String qualifier){ | public CompletionRequest(File editorFile, IPythonNature nature, IDocument doc, int documentOffset, PyCodeCompletion codeCompletion){ String[] strs = PySelection.getActivationTokenAndQual(doc, documentOffset); this.activationToken = strs[0]; this.qualifier = strs[1]; int qlen ... | 1319 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1319/050c31fb1b7ba3405cf15203621420f0686011fe/CompletionRequest.java/buggy/org.python.pydev/src/org/python/pydev/editor/codecompletion/CompletionRequest.java | [
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Map oids = new HashMap(); | Map oids = new HashMap(); | public void testLdapNameToNameEmpty() throws Exception { LdapDN name = new LdapDN(); Map oids = new HashMap(); oids.put( "dc", new OidNormalizer( "dc", new DeepTrimToLowerNormalizer() ) ); oids.put( "domaincomponent", new OidNormalizer( "dc", new DeepTrimToLowerNormalizer() ) ); ... | 54578 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54578/34d16a3366af953bef4b3d5f4cf0e7c6bda29ba6/LdapDNTest.java/clean/ldap/src/test/java/org/apache/directory/shared/ldap/name/LdapDNTest.java | [
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MyTableModel(JSDebugger db) { | MyTableModel(Main db) { | MyTableModel(JSDebugger db) { this.db = db; expressions = new Vector(); values = new Vector(); expressions.addElement(""); values.addElement(""); } | 19042 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19042/38e685a5a4f910f10f0cfff50348254cb452f08d/Main.java/clean/toolsrc/org/mozilla/javascript/tools/debugger/Main.java | [
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if (name != null && !name.equals(XmlUtil.findLocalNameByQualifiedName(pair.first))) { | if (name != null && pair.first != null && !name.equals(XmlUtil.findLocalNameByQualifiedName(pair.first))) { | public CachedValueProvider.Result<TypeDescriptor> compute() { final String name = tag.getAttributeValue("name"); if (name != null && !name.equals(XmlUtil.findLocalNameByQualifiedName(pair.first))) { myTypesMap.remove(pair); return new Result<TypeDescriptor>(null); } ... | 56598 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56598/ab95aabc7d3745603b04f36dfe79515c9033a8c9/XmlNSDescriptorImpl.java/buggy/source/com/intellij/xml/impl/schema/XmlNSDescriptorImpl.java | [
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public boolean get() { return includeLocalAddressesInNoderefs; } | public int get() { return portNumber; } | public boolean get() { return includeLocalAddressesInNoderefs; } | 8026 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8026/f43dcd3eaa49682824e40c5d428fa750be4517fe/Node.java/clean/src/freenet/node/Node.java | [
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descriptor.saveProjectData(); migrateToCPathEntries(scannerInfo); | descriptor.saveProjectData(); migrateToCPathEntries(scannerInfo); } }, null); | public static void updateScannerInfo(MakeScannerInfo scannerInfo) throws CoreException { IProject project = scannerInfo.getProject(); ICDescriptor descriptor = CCorePlugin.getDefault().getCProjectDescription(project); Element rootElement = descriptor.getProjectData(CDESCRIPTOR_ID); // Clear out all current childre... | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/09a4ea370cd03cca08ddfea0239bc0263a36f158/MakeScannerProvider.java/buggy/build/org.eclipse.cdt.make.core/src/org/eclipse/cdt/make/core/MakeScannerProvider.java | [
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if (numEntries == 0) return ifd; | if (numEntries == 0 || numEntries == 1) return ifd; | protected static Hashtable getIFD(RandomAccessStream in, long ifdNum, long globalOffset, long offset, boolean littleEndian) throws IOException { Hashtable ifd = new Hashtable(); // save little-endian flag to internal LITTLE_ENDIAN tag ifd.put(new Integer(LITTLE_ENDIAN), new Boolean(littleEndian)); ... | 55303 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55303/16b7f7dc61bdc9f1ed5351878d03039af49673df/TiffTools.java/buggy/loci/formats/TiffTools.java | [
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if (workspaceConfigDirectory != null) { FileSystem fs = fsc.getFileSystem(); String configDir = workspaceConfigDirectory + FileSystem.SEPARATOR + name; String configFile = configDir + FileSystem.SEPARATOR + WORKSPACE_XML; | if (virtualFS != null) { String configDir = workspaceConfigDirectory + FileSystem.SEPARATOR + name; String configFile = configDir + FileSystem.SEPARATOR + WORKSPACE_XML; try { virtualFS.createFolder(configDir); configWriter = new OutputStreamWriter( virtualFS.getOutputStream(configFile)); } catch (FileSystemExcept... | private synchronized WorkspaceConfig internalCreateWorkspaceConfig(String name, Element template) throws ConfigurationException { // The physical workspace home directory on disk (TODO encode name?) File directory = new F... | 48761 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48761/5178db7dd0238d39c0f5ec195c7ce049b267016c/RepositoryConfig.java/buggy/jackrabbit/src/main/java/org/apache/jackrabbit/core/config/RepositoryConfig.java | [
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log.debug(localAddress + " sent FLUSH_COMPLETED message to " | if(log.isDebugEnabled()) log.debug(localAddress + " sent FLUSH_COMPLETED message to " | private void onSuspect(Address address) { boolean flushOkCompleted = false; Message m = null; long viewID = 0; synchronized (sharedLock) { suspected.add(address); flushMembers.removeAll(suspected); viewID = currentViewId(); flushOkCompleted = flushOkSet.size() > 0 && flushOkSet.containsAll(flushMembers... | 3550 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3550/c6c36d6735dc44ea63c9889b4269856d34bd5108/FLUSH.java/clean/src/org/jgroups/protocols/pbcast/FLUSH.java | [
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if (in.match('=')) { | if (matchChar('=')) { | public int getToken() throws IOException { int c; tokenno++; // Check for pushed-back token if (this.pushbackToken != EOF) { int result = this.pushbackToken; this.pushbackToken = EOF; return result; } // Eat whitespace, possibly sensitive to... | 12564 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12564/5739d875ab983543fdf729f70a15773fdbe9b1bd/TokenStream.java/buggy/src/org/mozilla/javascript/TokenStream.java | [
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e.printStackTrace(); | e.printStackTrace( ); | public static URL getURL( String sPluginRelativePath ) { URL url = null; if ( Platform.getExtensionRegistry( ) != null ) { try { url = new URL( CoreUIPlugin.getDefault( ) .getBundle( ) .getEntry( "/" ), sPluginRelativePath ); //$NON-NLS-1$ } catch ( MalformedURLException e ) { e.printStack... | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/10fe950cbad09cea3732306ccb67e21cd29a304a/UIHelper.java/clean/core/org.eclipse.birt.core.ui/src/org/eclipse/birt/core/ui/utils/UIHelper.java | [
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if (!indexVariable.equals(element)) { | if(!indexVariable.equals(element)){ | public void visitReferenceExpression(PsiReferenceExpression ref) { super.visitReferenceExpression(ref); final PsiElement element = ref.resolve(); if (!indexVariable.equals(element)) { return; } final PsiElement parent = ref.getParent(); ... | 56598 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56598/dba8b183fc1b08e7ad664812bfc0c64d1e4abd3c/ForCanBeForeachInspection.java/clean/plugins/InspectionGadgets/src/com/siyeh/ig/verbose/ForCanBeForeachInspection.java | [
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fEntityScanner.scanQName(fElementQName); String rawname = fElementQName.rawname; if (fBindNamespaces) { fNamespaceContext.pushContext(); if (fScannerState == SCANNER_STATE_ROOT_ELEMENT) { if (fPerformValidation) { fErrorReporter.reportError(XMLMessageFormatter.XML_DOMAIN, "MSG_GRAMMAR_NOT_FOUND", new Object[]{ rawnam... | fEntityScanner.scanQName(fElementQName); String rawname = fElementQName.rawname; if (fBindNamespaces) { fNamespaceContext.pushContext(); if (fScannerState == SCANNER_STATE_ROOT_ELEMENT) { if (fPerformValidation) { fErrorReporter.reportError( XMLMessageFormatter.XML_DOMAIN, "MSG_GRAMMAR_NOT_FOUND", new Object[] { rawn... | protected boolean scanStartElement() throws IOException, XNIException { if (DEBUG_CONTENT_SCANNING) System.out.println(">>> scanStartElementNS()"); // Note: namespace processing is on by default fEntityScanner.scanQName(fElementQName); // REVISIT - [Q] Why do we need this local variable? -- mrglavas String rawnam... | 6373 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6373/3da96c599064fc1cad81a428d259454eef6d382a/XML11NSDocumentScannerImpl.java/buggy/src/org/apache/xerces/impl/XML11NSDocumentScannerImpl.java | [
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ListDataEvent lde = new ListDataEvent( com.gallery.GalleryRemote.GalleryRemote.getInstance().mainFrame, ListDataEvent.CONTENTS_CHANGED, 0, albumList.size() ); | ListDataEvent lde; if (albumList != null) { lde = new ListDataEvent( com.gallery.GalleryRemote.GalleryRemote.getInstance().mainFrame, ListDataEvent.CONTENTS_CHANGED, 0, albumList.size() ); } else { lde = new ListDataEvent( com.gallery.GalleryRemote.GalleryRemote.getInstance().mainFrame, ListDataEvent.CONTENTS_CHANGED, ... | void notifyListeners() { ListDataEvent lde = new ListDataEvent( com.gallery.GalleryRemote.GalleryRemote.getInstance().mainFrame, ListDataEvent.CONTENTS_CHANGED, 0, albumList.size() ); notifyListeners(lde); } | 5431 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5431/2273a24bf0895e8f47d20f8538ee761618810697/Gallery.java/buggy/gallery_remote/com/gallery/GalleryRemote/model/Gallery.java | [
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while ( ! currentSibling.hasNext() ) | try | public boolean hasNext() { while ( ! currentSibling.hasNext() ) { if ( ! goBack() ) { return false; } } return true; } | 12974 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12974/c4fc5760f694eb94d37e66961a12faa59de78178/PrecedingAxisIterator.java/buggy/src/java/main/org/jaxen/util/PrecedingAxisIterator.java | [
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getHelper().stop(); | if(getHelper() != null) getHelper().stop(); | public void stop() throws Exception { getHelper().stop(); super.stop(); } | 14172 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14172/5cb1e27576c3d4676717afd58df32887df7e86f8/Container.java/buggy/plugins/internal/org.restlet/src/org/restlet/Container.java | [
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this.keyboardHandler.close(); | keyboardHandler.close(); | private final synchronized int decRefCount(boolean forceClose) { refCount--; log.debug("refCount.dec=" + refCount); if ((refCount == 0) || forceClose) { onClose(); if (keyboardHandler != null) { this.keyboardHandler.close(); } if (mouseHandler != null) { this.mouseHandler.close(); } if (graphics !... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/38325cf17a9cf9b3ef394218a5b22c43a59d2f83/JNodeToolkit.java/clean/gui/src/awt/org/jnode/awt/JNodeToolkit.java | [
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StringTokenizer tokenizer = new StringTokenizer(infixParam); | String infixToPostFix(String infixParam) { String SPACE = " "; StringBuffer postfix = new StringBuffer(); StringTokenizer tokenizer = new StringTokenizer(infixParam); for (int i = 0, j = tokenizer.countTokens(); i < j; i++) { String token = tokenizer.nextToken(); System.out.println... | 45952 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45952/f61e7513ede4b005823db32d3a8e8dc38e9ebf91/RuleTest.java/buggy/src/java/org/apache/log4j/chainsaw/rule/RuleTest.java | [
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itm.reuse( la ); dWidth = Math.max( itm.getFullWidth( ), dWidth ); dHeight += insCA.getTop( ) | itm.reuse( la, maxWrappingSize ); dDeltaHeight = insCA.getTop( ) | public final Size compute( IDisplayServer xs, Chart cm, SeriesDefinition[] seda, RunTimeContext rtc ) throws ChartException { // THREE CASES: // 1. ALL SERIES IN ONE ARRAYLIST // 2. ONE SERIES PER ARRAYLIST // 3. ALL OTHERS Legend lg = cm.getLegend( ); if ( !lg.isSetOrientation( ) ) { throw new ChartExcepti... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/2d2a611b1bd993e5b8997aa31f661b8486b93a43/LegendBuilder.java/buggy/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/computation/LegendBuilder.java | [
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return createLoop(LOOP_FOR, body, test, init, incr, lineno); | return createLoop((Node.Jump)loop, LOOP_FOR, body, test, init, incr); | Node createFor(Node init, Node test, Node incr, Node body, int lineno) { return createLoop(LOOP_FOR, body, test, init, incr, lineno); } | 51996 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51996/792304a2a96cea5a80c02ff6a02a98f830f7393d/IRFactory.java/buggy/js/rhino/src/org/mozilla/javascript/IRFactory.java | [
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buffer.append("thread-id=").append(getThreadId()).append('\n'); | buffer.append("thread-id=").append(getThreadId()).append('\n'); | public String toString() { StringBuffer buffer = new StringBuffer(); buffer.append("thread-id=").append(getThreadId()).append('\n'); MIFrame f = getFrame(); if (f != null) { buffer.append(getFrame().toString()); } return buffer.toString(); } | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/f3a9fae6384fd8bb36474b1661bb6d0b65b38d5f/MISteppingRangeEvent.java/buggy/debug/org.eclipse.cdt.debug.mi.core/mi/org/eclipse/cdt/debug/mi/core/event/MISteppingRangeEvent.java | [
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live.addAll(datanodeMapByName.values()); | live.addAll(datanodeMap.values()); | public void DFSNodesStatus(Vector live, Vector dead) { synchronized (heartbeats) { synchronized (datanodeMap) { live.addAll(datanodeMapByName.values()); dead.addAll(deaddatanodeMap.values()); } } } | 51718 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51718/1ff42c841f233b60aa05557014db0d7b72d2c1f0/FSNamesystem.java/buggy/src/java/org/apache/hadoop/dfs/FSNamesystem.java | [
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this.month = Integer.valueOf(monthHidden.getValue().toString()); | final String monthValue = monthHidden.getValue().toString(); if (monthValue.length() > 0) { this.month = Integer.valueOf(monthValue); } | public void setMonthHidden(HtmlInputHidden monthHidden) { if (monthHidden.getValue() != null) { this.month = Integer.valueOf(monthHidden.getValue().toString()); } this.monthHidden = monthHidden; } | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/f41ae5ccb66cc44fcfcb1d22fbdcd7480c9901f2/SOPEvaluationManagementBackingBean.java/clean/src/net/sourceforge/fenixedu/presentationTier/backBeans/sop/evaluation/SOPEvaluationManagementBackingBean.java | [
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{ e.doit = ( "0123456789".indexOf( e.text ) >= 0 ); } | { try { Integer.parseInt( e.text ); e.doit = true; } catch ( Exception _ ) { e.doit = false; } } | public void verifyText( VerifyEvent e ) { e.doit = ( "0123456789".indexOf( e.text ) >= 0 ); } | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/12e7dfeaba4c2c6b319a7b326a03139b5c5222de/TableOptionDialog.java/buggy/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/internal/ui/dialogs/TableOptionDialog.java | [
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public static String jsFunction_concat(Context cx, Scriptable thisObj, Object[] args, Function funObj) { | private static String jsFunction_concat(String target, Object[] args) { int N = args.length; if (N == 0) { return target; } | public static String jsFunction_concat(Context cx, Scriptable thisObj, Object[] args, Function funObj) { StringBuffer result = new StringBuffer(); result.append(ScriptRuntime.toString(thisObj)); for (int i = 0; i < args.length; i++) result... | 11366 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11366/b6331020dcf96bb85dae57ee2a2ce947b6b0477a/NativeString.java/buggy/js/rhino/src/org/mozilla/javascript/NativeString.java | [
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public Ability getAbilityKeyed(final AbilityCategory aCategory, final String aKey) { if ( aCategory == AbilityCategory.FEAT ) { return getFeatKeyed(aKey); } final List<Ability> abilities = getAggregateAbilityList(aCategory); for ( final Ability ability : abilities ) { if ( ability.getKeyName().equals(aKey) ... | 48301 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48301/376816acf8bf134fa77bd6ea5c602dbe9af9bfbd/PlayerCharacter.java/clean/code/src/java/pcgen/core/PlayerCharacter.java | [
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else | else | public String getCurrentWorkerETC() { if ( SecurityService.isSuperUser() ) { return MessageFormat.format(" due {0} <br> Last {1} in {2}s <br> Current {3} {4}", new Object[] { lock.getExpires(), searchIndexBuilder.getLastDocument(), searchIndexBuilder.getLastElapsed(), searchInde... | 2021 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2021/6a4b173c6cb092a278a56da552cff2c113eaefc4/SearchServiceImpl.java/clean/search/search-impl/impl/src/java/org/sakaiproject/search/component/service/impl/SearchServiceImpl.java | [
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linePos ++; if (linePos == line.length()) | linePos++; if (linePos == line.length()) { | public int read() throws IOException { if (tokenizer == null) tokenizer = new LineTokenizer(); while (line == null || line.length() == 0) { line = tokenizer.getToken(in); if (line == null) return -1; for (Enumeration e = filters.elements(); e.... | 639 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/639/01a0be022dda5f39aabf77afc4fb7c1d4c468218/TokenFilter.java/clean/src/main/org/apache/tools/ant/filters/TokenFilter.java | [
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m_columnReplacements.put("ipinterface.ipaddr", new RowHasBogusData("ipInterface", "ipAddr")); | m_columnReplacements.put("ipinterface.ipaddr", new RowHasBogusData("ipInterface", "ipAddr")); | public Installer() { AutoIntegerIdMapStore snmpInterfaceId = new AutoIntegerIdMapStore(1, new String[] { "nodeid", "ipaddr", "snmpifindex" }); m_columnReplacements.put("snmpinterface.id", snmpInterfaceId); AutoIntegerIdMapStore ipInterfaceId = new AutoIntegerIdMapS... | 25465 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/25465/9c0a59382d378a750edf84524762ab71e335b4b3/Installer.java/clean/opennms-install/src/main/java/org/opennms/install/Installer.java | [
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MagnetOptions magnet = MagnetOptions.createMagnet(textQuery, fileName, urn, defaultURLs); | magnet = MagnetOptions.createMagnet(textQuery, fileName, urn, defaultURLs); | private void readObject(ObjectInputStream stream) throws IOException, ClassNotFoundException { if (getMagnet() == null) { ObjectInputStream.GetField fields = stream.readFields(); String textQuery = (String) fields.get("_textQuery", null); URN urn = (URN) fields.get("_urn", null); String fileName = (String) fi... | 5134 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5134/bedfb975f1afbac4b0f7093c9013c7bae750a9bc/MagnetDownloader.java/clean/components/gnutella-core/src/main/java/com/limegroup/gnutella/downloader/MagnetDownloader.java | [
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VFSManager.runInWorkThread(printable); | printable.print(); | public static void print(final View view, final Buffer buffer, boolean selection) { job = getPrintJob(); job.setJobName(buffer.getPath()); boolean header = jEdit.getBooleanProperty("print.header"); boolean footer = jEdit.getBooleanProperty("print.footer"); boolean lineNumbers = jEdit.getBooleanProperty("print.lin... | 8690 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8690/f7732ce5bc20ffedae52e7d1af3efcbef73061c6/BufferPrinter1_3.java/buggy/org/gjt/sp/jedit/print/BufferPrinter1_3.java | [
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public int[] getCurrentExpressionNodeStack() { return m_currentExpressionNodes; } | public IntStack getCurrentExpressionNodeStack() { return m_currentExpressionNodes; } | public int[] getCurrentExpressionNodeStack() { return m_currentExpressionNodes; } | 2723 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2723/d51b08356cc6f8c78bee2a852df4e9888db4d097/XPathContext.java/buggy/src/org/apache/xpath/XPathContext.java | [
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if (in.match('g')) | if (matchChar('g')) | public int getToken() throws IOException { int c; tokenno++; // Check for pushed-back token if (this.pushbackToken != EOF) { int result = this.pushbackToken; this.pushbackToken = EOF; return result; } // Eat whitespace, possibly sensitive to... | 47345 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47345/5739d875ab983543fdf729f70a15773fdbe9b1bd/TokenStream.java/buggy/src/org/mozilla/javascript/TokenStream.java | [
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return ((Byte) Support.convert(pi.value, java.sql.Types.TINYINT, null)).byteValue(); | return ((Byte) Support.convert(this, pi.value, java.sql.Types.TINYINT, null)).byteValue(); | public byte getByte(int parameterIndex) throws SQLException { ParamInfo pi = getParameter(parameterIndex); return ((Byte) Support.convert(pi.value, java.sql.Types.TINYINT, null)).byteValue(); } | 2029 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2029/f4ca02561623734f948ac817af46e63b233d7b9b/JtdsCallableStatement.java/buggy/src/main/net/sourceforge/jtds/jdbc/JtdsCallableStatement.java | [
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out.println("\tpublic static String[] _elements = {"); for(int i=0; i<allTypes.size(); i++) { String type = (String) allTypes.elementAt(i); out.print("\t\t\"" + type + "\""); if(i<allTypes.size()-1) out.println(","); else out.println(); } out.println("\t};"); out.println(); | out.println("\tpublic static String[] _elements = {"); for(int i=0; i<allTypes.size(); i++) { String type = (String) allTypes.elementAt(i); out.print("\t\t\"" + type + "\""); if(i<allTypes.size()-1) out.println(","); else out.println(); } out.println("\t};"); out.println(); | public void writeJava(PrintWriter out) throws XOMException { // Write header information for the java file out.println("/" + "*"); out.println("/" + "/ This java file was automatically generated"); out.println("/" + "/ from mining model '" + model.name + "'"); if(!testMode) out.println("/" + "/ on " + new Date... | 51263 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51263/b5b5168edc3af09cb74945a80b0c36e6630ed502/MetaGenerator.java/clean/src/main/mondrian/xom/MetaGenerator.java | [
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public GlobalObject(RhinoCore core, Application app) { | public GlobalObject(RhinoCore core, Application app, boolean perThread) { | public GlobalObject(RhinoCore core, Application app) { this.core = core; this.app = app; } | 46029 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46029/75ebaa75be62e0b526b1669eccdfe67f70e99653/GlobalObject.java/buggy/src/helma/scripting/rhino/GlobalObject.java | [
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int sizeT = results[1] + 1; int sizeZ = results[0] + 1; | int sizeT = results[1]; int sizeZ = results[0]; /* debug */ System.out.println("sizeT : " + sizeT); /* debug */ System.out.println("sizeZ : " + sizeZ); | public void run(ImagePlus ip, Object[] metadata) { try { login(true); imageP = ip; getHelpers(); Experimenter user = OMERetrieve.getUser(df); // start the import process IJ.showStatus("OmeUpload: Starting import..."); im.startImport(user); IJ.showProgress(0.15); //getti... | 55415 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55415/b6a99426084eff70237a7268a6df73e831dce70c/OMETools.java/clean/loci/ome/ij/OMETools.java | [
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public void createPartControl(Composite parent) { paintCanvas = new Canvas(parent, SWT.BORDER | SWT.V_SCROLL | SWT.H_SCROLL | SWT.NO_REDRAW_RESIZE); // set up a GC for drawing the tracking rectangle gc = new GC(paintCanvas); gc.setForeground(paintCanvas.getForeground()); gc.setLineStyle(SWT.LINE_SOLID); // ... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/5466df1b15264ff6a7a1f1e22be2e236512a23bf/BoxView.java/buggy/examples/org.eclipse.ui.examples.undo/Eclipse UI Examples Undo/org/eclipse/ui/examples/undo/views/BoxView.java | [
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IConfigurationElement[] elements = definingElement.getChildren(CHILD_ENABLEMENT); if (elements.length == 0) { String className = definingElement.getAttribute(ATT_OBJECT_CLASS); if (className == null) return null; enablement = new ActionExpression(ATT_OBJECT_CLASS, className); } else enablement = new ActionExpression(e... | initializeEnablement(); | public ActionExpression getEnablement() { if (!hasReadEnablement) { hasReadEnablement = true; IConfigurationElement[] elements = definingElement.getChildren(CHILD_ENABLEMENT); if (elements.length == 0) { String className = definingElement.getAttribute(ATT_OBJECT_CLASS); if (clas... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/e4870ae566720c9a538c7ef68573b301746e6c42/DecoratorDefinition.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/decorators/DecoratorDefinition.java | [
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File file = resolvedLocation.toFile(); if (!file.exists()) { locationString += " " + FILE_NOT_EXIST_TEXT; | IFileInfo info = getFileInfo(location); if(info == null) return UNKNOWN_LABEL; if (!info.exists()) { return NLS.bind(FILE_NOT_EXIST_TEXT,location.toString()); | private String getLocationText(IResource resource) { if (!resource.isLocal(IResource.DEPTH_ZERO)) return NOT_LOCAL_TEXT; IPath resolvedLocation = resource.getLocation(); IPath location = resolvedLocation; if (resource.isLinked()) { location = resource.getRawLocation(); } if (location == null) { return NOT_... | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/25901e56fe617e185a8936e0895255ce485214a4/ResourceInfoPage.java/clean/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/ide/dialogs/ResourceInfoPage.java | [
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Iterator i = c1.iterator(); if (!i.hasNext()) return Collections.EMPTY_SET; ProgramLocation o = (ProgramLocation) i.next(); if (!i.hasNext()) return Collections.singleton(o.getMethod()); Set result = new LinkedHashSet(); for (;;) { result.add(o.getMethod()); if (!i.hasNext()) break; o = (ProgramLocation) i.next(); } re... | return c1; | public Collection getCallers(jq_Method callee) { if (edges == null) invalidateCache(); MultiMap m1 = edges.invert(); Collection c1 = m1.getValues(callee); Iterator i = c1.iterator(); if (!i.hasNext()) return Collections.EMPTY_SET; ProgramLocation o = (ProgramLocation) i.nex... | 3029 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3029/11081435c9d8757c2e96f9c35e397b60f683e097/CachedCallGraph.java/buggy/joeq_core/joeq/Compiler/Quad/CachedCallGraph.java | [
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defineMethod("inspect", callbackFactory.getMethod("inspect")); defineMethod("dump", callbackFactory.getMethod("dump")); defineMethod("upcase", callbackFactory.getMethod("upcase")); defineMethod("downcase", callbackFactory.getMethod("downcase")); defineMethod("capitalize", callbackFactory.getMethod("capitalize")); defi... | defineAlias("next", "succ"); defineAlias("next!", "succ!"); defineAlias("size", "length"); defineAlias("slice", "[]"); | protected void initializeClass() { includeModule(getRuntime().getClasses().getComparableModule()); includeModule(getRuntime().getClasses().getEnumerableModule()); /* FIXME Not needed because of the new allocObject method. * This is an example for the definition of singleton methods. ... | 49476 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49476/803c66ee682936beecc8a43fe2cfc90fe5645b22/StringMetaClass.java/buggy/src/org/jruby/runtime/builtin/meta/StringMetaClass.java | [
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private ImmutableMuleEndpoint() { } | 28323 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28323/e7ce83a2b2d33f3fef75341e6dea393883e26157/ImmutableMuleEndpoint.java/buggy/mule/src/java/org/mule/impl/ImmutableMuleEndpoint.java | [
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} | } | private void updateSelection(boolean controlPressed) { // Update the rows int lo_row = table.rowAtPoint(begin); int hi_row = table.rowAtPoint(curr); ListSelectionModel rowModel = table.getSelectionModel(); if (lo_row != -1 && hi_row != -1) { if (c... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/f7b0a77266671350e38451a50ce054282a5860ef/BasicTableUI.java/buggy/core/src/classpath/javax/javax/swing/plaf/basic/BasicTableUI.java | [
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File logDir = new File(_pageContext.getServletConfig().getInitParameter("logDir")); | String logDirName = _pageContext.getServletConfig().getInitParameter("logDir"); if (logDirName == null) { logDirName = _pageContext.getServletContext().getInitParameter("logDir"); } File logDir = new File(logDirName); | protected void writeContent(Writer out) throws JspException { File logDir = new File(_pageContext.getServletConfig().getInitParameter("logDir")); System.out.println("Scanning directory: " + logDir.getAbsolutePath() + " for log files."); File cacheDir = new File(logDir, "_cache"); if(!cac... | 52149 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52149/49a89f61afe557f3ab9c55b92b44e7d1afa1b53b/XSLTag.java/buggy/reporting/jsp/src/net/sourceforge/cruisecontrol/taglib/XSLTag.java | [
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alertNode.addChild("#", DISCONNECTED.replace("{DISCONNECTED}", Integer.toString(disconnected))); | alertNode.addChild("#", replace(DISCONNECTED, "{DISCONNECTED}", Integer.toString(disconnected))); | public HTMLNode getHTMLText() { HTMLNode alertNode = new HTMLNode("div"); int disconnected = peers - conns; if (peers == 0) { if(n.isTestnetEnabled()) alertNode.addChild("#", NO_PEERS_TESTNET); else alertNode.addChild("#", NO_PEERS_DARKNET); } else if (conns == 0) { alertNode.addChild("#", NO_CONNS); ... | 46731 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46731/89258c127cb3b0f73aa57374b50b6d35a02ac021/PeerManagerUserAlert.java/clean/src/freenet/node/useralerts/PeerManagerUserAlert.java | [
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String connstr = sequenceserver ; DAS_SequenceRetreive seq_das = new DAS_SequenceRetreive(connstr) ; sequence = seq_das.get_sequence(swissp_id); | DAS_SequenceRetreive seq_das = new DAS_SequenceRetreive(config) ; try { sequence = seq_das.get_sequence(swissp_id); } catch ( ConfigurationException e) { e.printStackTrace(); System.out.println("could not retreive any sequence from DAS servers"); return ""; } | private String getDASSequence(String swissp_id) { // get Sequence using DAS ... // get sequence from sequence server // speed up -> store sequence mappings in memory -> faster String sequence ; sequence = getSequenceFromMemory(swissp_id) ; if ( sequence == null ) { String connstr = sequenceserver ; DAS_S... | 52521 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52521/3513ae66b40fe99d20f70c38cf1792140f4d153b/DASAlignment_Handler.java/clean/src/org/biojava/spice/DAS/DASAlignment_Handler.java | [
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System.out.println("Usage: JSpeexDec [options] input.spx output.wav"); System.out.println("Where: input.spx the Speex file to use as input"); System.out.println(" output.wav the PCM wave file to create"); | version(); System.out.println(""); System.out.println("Usage: JSpeexDec [options] input_file output_file"); System.out.println("Where:"); System.out.println(" input_file can be:"); System.out.println(" filename.spx an Ogg Speex file"); System.out.println(" filename.* a raw Speex file"); System.out.println(" ... | public static void usage() { System.out.println("Usage: JSpeexDec [options] input.spx output.wav"); System.out.println("Where: input.spx the Speex file to use as input"); System.out.println(" output.wav the PCM wave file to create"); System.out.println("Options: -h, --help This help"); System.out.... | 6221 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6221/55eb35151f5fcff336e27c126b46f489b309cc24/JSpeexDec.java/buggy/main/trunk/src/JSpeexDec.java | [
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public SVGOMFESpecularLightingElement(String prefix, AbstractDocument owner) { super(prefix, owner); | protected SVGOMFESpecularLightingElement() { | public SVGOMFESpecularLightingElement(String prefix, AbstractDocument owner) { super(prefix, owner); } | 46680 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46680/c91b2fb5364b1bf541875570f744ed45f27d936e/SVGOMFESpecularLightingElement.java/buggy/sources/org/apache/batik/dom/svg/SVGOMFESpecularLightingElement.java | [
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private final void scan(ObjectReference object) throws InlinePragma { if (Assert.VERIFY_ASSERTIONS) Assert._assert(workQueue.pop().isNull()); | private final void scan(ObjectReference object) throws InlinePragma { if (Assert.VERIFY_ASSERTIONS) Assert._assert(workQueue.pop().isNull()); | private final void scan(ObjectReference object) throws InlinePragma { if (Assert.VERIFY_ASSERTIONS) Assert._assert(workQueue.pop().isNull()); while (!object.isNull()) { if (Assert.VERIFY_ASSERTIONS) Assert._assert(!RefCountSpace.isGreen(object)); if (RefCountSpace.isGrey(object)) { if (RefCo... | 49871 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49871/57a34fa3e6e607d84b46e06082997a4771a25a85/TrialDeletion.java/buggy/MMTk/src/org/mmtk/utility/TrialDeletion.java | [
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killAndCleanup(); | killAndCleanup(false); | public synchronized void jobHasFinished() throws IOException { if (getRunState() == TaskStatus.RUNNING) { killAndCleanup(); } else { cleanup(); } } | 49935 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49935/74bc43b8073ede3782a2b2561c09d7829f061901/TaskTracker.java/clean/src/java/org/apache/hadoop/mapred/TaskTracker.java | [
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initArray(Math.max(parent.size(), 1), weight), | Utils.initArray(Math.max(parent.size(), 1), weight), | public static SIRJoiner createUniformRR(SIRContainer parent, JExpression weight) { // make a uniform rr joiner return new SIRJoiner(parent, SIRJoinType.WEIGHTED_RR, initArray(Math.max(parent.size(), 1), weight), true); } | 47772 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47772/47119f6f6531154a0a367e20cc4089093c2af801/SIRJoiner.java/clean/streams/src/at/dms/kjc/sir/SIRJoiner.java | [
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protected XMLLanguage(String name, String mime) { super(name, mime); myFormattingModelBuilder = new FormattingModelBuilder() { public FormattingModel createModel(final PsiElement element, final CodeStyleSettings settings) { final ASTNode root = SourceTreeToPsiMap.psiElementToTree(element); return new PsiBasedFormatting... | public XMLLanguage() { this("XML", "text/xml"); | protected XMLLanguage(String name, String mime) { super(name, mime); myFormattingModelBuilder = new FormattingModelBuilder() { public FormattingModel createModel(final PsiElement element, final CodeStyleSettings settings) { final ASTNode root = SourceTreeToPsiMap.psiElementToTree(element); re... | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/0e2424bdd99b04ea5fa3952ce487bcee1c42747d/XMLLanguage.java/buggy/source/com/intellij/lang/xml/XMLLanguage.java | [
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/*format = normalizeFormat( ); if ( format == null ) { logger.log( Level.SEVERE, "[ReportRunner] Invalid output format." ); return false; } htmlType = normalizeHTMLType( ); if ( htmlType == null ) { logger.log( Level.SEVERE, "[ReportRunner] Invalid html type." ); return false; } */ | private boolean validateAndPrepareArguments( ) { if ( designName == null ) { printUsage( ); return false; } /*format = normalizeFormat( ); if ( format == null ) { logger.log( Level.SEVERE, "[ReportRunner] Invalid output format." ); //$NON-NLS-1$ return false; } htmlType = normalizeHTMLType( ); if ( ... | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/e6cd170d84a9ed2d8f1343b14a90fdd7a8d57a33/ReportRunner.java/buggy/engine/org.eclipse.birt.report.engine/src/org/eclipse/birt/report/engine/api/ReportRunner.java | [
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if (xformsControl != null) xformsControl.evaluate(pipelineContext); | public void end(String uri, String localname, String qName) throws SAXException { final ContentHandler contentHandler = handlerContext.getController().getOutput(); // xforms:trigger and xforms:submit final String effectiveId = handlerContext.getEffectiveId(elementAttributes); final XForm... | 52783 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52783/6151deeacd0d85e7d1b3e77e963676b7ae2954c8/XFormsTriggerHandler.java/clean/src/java/org/orbeon/oxf/xforms/processor/handlers/XFormsTriggerHandler.java | [
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try { result[0] = busyOpenWorkbenchWindow(perspID, input); } catch (WorkbenchException e) { result[0] = e; | doOpenFirstTimeWindow(); | public void run() { try { result[0] = busyOpenWorkbenchWindow(perspID, input); } catch (WorkbenchException e) { result[0] = e; } } | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/bc508e6d12aaf5e44777fe0ae256945be5760cc6/Workbench.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/Workbench.java | [
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return defaultValue; | fDefaultValue = defaultValue; return augs; | XMLString handleEndElement(QName element, Augmentations augs) { fCurrentPSVI = (ElementPSVImpl)augs.getItem(ELEM_PSVI); if (fCurrentPSVI == null) { fCurrentPSVI = fElemPSVI; augs.putItem(ELEM_PSVI, fCurrentPSVI); } fCurrentPSVI.reset(); // if we are skipping,... | 46079 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46079/0c89615b0bdfe565e769952ce9d81b62b7cd076a/XMLSchemaValidator.java/clean/src/org/apache/xerces/impl/xs/XMLSchemaValidator.java | [
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if (commandManager == null) { throw new NullPointerException( "The callback needs a command manager"); } if (activeChecker == null) { throw new NullPointerException( "The callback needs an active callback"); } this.activeChecker = activeChecker; this.bindingManager = bindingManager; this.commandManager = commandManag... | }); | public CommandCallback(final BindingManager bindingManager, final CommandManager commandManager, final IActiveChecker activeChecker) { if (bindingManager == null) { throw new NullPointerException( "The callback needs a binding manager"); //$NON-NLS-1$ } if (commandManager == null) { throw new N... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/2e3290c413bf86d63c91002a86b9b3a355837bf2/ExternalActionManager.java/buggy/bundles/org.eclipse.jface/src/org/eclipse/jface/action/ExternalActionManager.java | [
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public void textDecl(String version, String encoding) | public void textDecl(String version, String encoding, Augmentations augs) | public void textDecl(String version, String encoding) throws XNIException { if (fDocumentHandler != null) { fDocumentHandler.textDecl(version, encoding); } } // textDecl(String,String) | 46079 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46079/1281996de10d3af1b51f0b4d78cfcd75d8ade6fe/PassThroughFilter.java/buggy/samples/xni/PassThroughFilter.java | [
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public static long add(long value1, long value2) { if (value1 == infinite){ if (value2== negInfinite) return 0; else return infinite; } else if (value2 == infinite){ if (value1== negInfinite) return 0; else return infinite; } else if (value1 == negInfinite) return negInfinite; else if (value2 == negInfinite) return neg... | public void add(long toAdd) { value = add(toAdd, value); | public static long add(long value1, long value2) { if (value1 == infinite){ if (value2== negInfinite) return 0; else return infinite; } else if (value2 == infinite){ if (value1== negInfinite) return 0; else return infinite; } else if (value1 == negInfinite) return negInfinite; else if (valu... | 57538 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57538/88e3c75ba71c7c3e23478b1c3ff126ef3c6fe3ab/MesquiteLong.java/buggy/branches/Mesquite1.x/Mesquite Project/Source/mesquite/lib/MesquiteLong.java | [
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if(ASS) | if(AS.DEBUG) | private void initForReal() {// System.out.println("++++ initForReal() start" ); // Let's ask for everything upfront to get this all out of the // way (from the user's point of view) try { PrivilegeManager.enablePrivilege("Debugger"); PrivilegeManager.enabl... | 7555 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7555/2de73cf99dce60cce549e7757f841284b68d1220/JSDebuggerApp.java/buggy/js/jsdj/classes/com/netscape/jsdebugging/ifcui/JSDebuggerApp.java | [
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getWriter().print(BaseTestRunner.getFilteredTrace(booBoo.trace())); } | getWriter().print(BaseTestRunner.getFilteredTrace(booBoo.trace())); } | protected void printDefectTrace(TestFailure booBoo) { getWriter().print(BaseTestRunner.getFilteredTrace(booBoo.trace())); } | 51263 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51263/b5b5168edc3af09cb74945a80b0c36e6630ed502/MondrianResultPrinter.java/clean/testsrc/main/mondrian/test/MondrianResultPrinter.java | [
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