number
int64 2
7.91k
| title
stringlengths 1
290
| body
stringlengths 0
228k
| state
stringclasses 2
values | created_at
timestamp[s]date 2020-04-14 18:18:51
2025-12-16 10:45:02
| updated_at
timestamp[s]date 2020-04-29 09:23:05
2025-12-16 19:34:46
| closed_at
timestamp[s]date 2020-04-29 09:23:05
2025-12-16 14:20:48
⌀ | url
stringlengths 48
51
| author
stringlengths 3
26
⌀ | comments_count
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| labels
listlengths 0
4
|
|---|---|---|---|---|---|---|---|---|---|---|
2,179
|
Load small datasets in-memory instead of using memory map
|
Currently all datasets are loaded using memory mapping by default in `load_dataset`.
However this might not be necessary for small datasets. If a dataset is small enough, then it can be loaded in-memory and:
- its memory footprint would be small so it's ok
- in-memory computations/queries would be faster
- the caching on-disk would be disabled, making computations even faster (no I/O bound because of the disk)
- but running the same computation a second time would recompute everything since there would be no cached results on-disk. But this is probably fine since computations would be fast anyway + users should be able to provide a cache filename if needed.
Therefore, maybe the default behavior of `load_dataset` should be to load small datasets in-memory and big datasets using memory mapping.
|
CLOSED
| 2021-04-07T09:58:16
| 2021-04-20T10:04:04
| 2021-04-20T10:04:03
|
https://github.com/huggingface/datasets/issues/2179
|
lhoestq
| 0
|
[
"enhancement",
"generic discussion"
] |
2,176
|
Converting a Value to a ClassLabel
|
Hi!
In the docs for `cast`, it's noted that `For non-trivial conversion, e.g. string <-> ClassLabel you should use map() to update the Dataset.`
Would it be possible to have an example that demonstrates such a string <-> ClassLabel conversion using `map`? Thanks!
|
CLOSED
| 2021-04-06T22:54:16
| 2022-06-01T16:31:49
| 2022-06-01T16:31:49
|
https://github.com/huggingface/datasets/issues/2176
|
nelson-liu
| 2
|
[
"enhancement"
] |
2,175
|
dataset.search_batch() function outputs all -1 indices sometime.
|
I am working with RAG and playing around with different faiss indexes. At the moment I use **index = faiss.index_factory(768, "IVF65536_HNSW32,Flat")**.
During the retrieval phase exactly in [this line of retrieval_rag.py](https://github.com/huggingface/transformers/blob/master/src/transformers/models/rag/retrieval_rag.py#L231) an error issue when all retrieved indices are -1. Please refer to the screenshot of a PID worker.
Here, my retrieve batch size is 2 and n_docs is 5. I can solve this by working around np. stack, but I want to ask, why we get an output index of -1. Do you have any idea :) ?
Is this a problem of the index, where the faiss can't find any similar vector?
Is there documentation on the output index being -1?
@lhoestq
|
CLOSED
| 2021-04-06T21:50:49
| 2021-04-16T12:21:16
| 2021-04-16T12:21:15
|
https://github.com/huggingface/datasets/issues/2175
|
shamanez
| 6
|
[] |
2,170
|
Wikipedia historic dumps are deleted but hf/datasets hardcodes dump date
|
Wikimedia does not keep all historical dumps. For example, as of today https://dumps.wikimedia.org/kowiki/ only provides
```
20201220/ 02-Feb-2021 01:36 -
20210101/ 21-Feb-2021 01:26 -
20210120/ 02-Mar-2021 01:25 -
20210201/ 21-Mar-2021 01:26 -
20210220/ 02-Apr-2021 01:26 -
20210301/ 03-Mar-2021 08:10 -
20210320/ 21-Mar-2021 18:13 -
20210401/ 03-Apr-2021 10:08 -
latest/ 03-Apr-2021 10:08 -
```
However, the wikipedia dataset provided in the library, only supports the following configs, none of which are applicable anymore when disregarding the cached datasets:
```
ValueError: BuilderConfig 20210401.ko not found. Available: ['20200501.aa', '20200501.ab', '20200501.ace', '20200501.ady', '20200501.af', '20200501.ak', '20200501.als', '20200501.am', '20200501.an', '20200501.ang', '20200501.ar', '20200501.arc', '20200501.arz', '20200501.as', '20200501.ast', '20200501.atj', '20200501.av', '20200501.ay', '20200501.az', '20200501.azb', '20200501.ba', '20200501.bar', '20200501.bat-smg', '20200501.bcl', '20200501.be', '20200501.be-x-old', '20200501.bg', '20200501.bh', '20200501.bi', '20200501.bjn', '20200501.bm', '20200501.bn', '20200501.bo', '20200501.bpy', '20200501.br', '20200501.bs', '20200501.bug', '20200501.bxr', '20200501.ca', '20200501.cbk-zam', '20200501.cdo', '20200501.ce', '20200501.ceb', '20200501.ch', '20200501.cho', '20200501.chr', '20200501.chy', '20200501.ckb', '20200501.co', '20200501.cr', '20200501.crh', '20200501.cs', '20200501.csb', '20200501.cu', '20200501.cv', '20200501.cy', '20200501.da', '20200501.de', '20200501.din', '20200501.diq', '20200501.dsb', '20200501.dty', '20200501.dv', '20200501.dz', '20200501.ee', '20200501.el', '20200501.eml', '20200501.en', '20200501.eo', '20200501.es', '20200501.et', '20200501.eu', '20200501.ext', '20200501.fa', '20200501.ff', '20200501.fi', '20200501.fiu-vro', '20200501.fj', '20200501.fo', '20200501.fr', '20200501.frp', '20200501.frr', '20200501.fur', '20200501.fy', '20200501.ga', '20200501.gag', '20200501.gan', '20200501.gd', '20200501.gl', '20200501.glk', '20200501.gn', '20200501.gom', '20200501.gor', '20200501.got', '20200501.gu', '20200501.gv', '20200501.ha', '20200501.hak', '20200501.haw', '20200501.he', '20200501.hi', '20200501.hif', '20200501.ho', '20200501.hr', '20200501.hsb', '20200501.ht', '20200501.hu', '20200501.hy', '20200501.ia', '20200501.id', '20200501.ie', '20200501.ig', '20200501.ii', '20200501.ik', '20200501.ilo', '20200501.inh', '20200501.io', '20200501.is', '20200501.it', '20200501.iu', '20200501.ja', '20200501.jam', '20200501.jbo', '20200501.jv', '20200501.ka', '20200501.kaa', '20200501.kab', '20200501.kbd', '20200501.kbp', '20200501.kg', '20200501.ki', '20200501.kj', '20200501.kk', '20200501.kl', '20200501.km', '20200501.kn', '20200501.ko', '20200501.koi', '20200501.krc', '20200501.ks', '20200501.ksh', '20200501.ku', '20200501.kv', '20200501.kw', '20200501.ky', '20200501.la', '20200501.lad', '20200501.lb', '20200501.lbe', '20200501.lez', '20200501.lfn', '20200501.lg', '20200501.li', '20200501.lij', '20200501.lmo', '20200501.ln', '20200501.lo', '20200501.lrc', '20200501.lt', '20200501.ltg', '20200501.lv', '20200501.mai', '20200501.map-bms', '20200501.mdf', '20200501.mg', '20200501.mh', '20200501.mhr', '20200501.mi', '20200501.min', '20200501.mk', '20200501.ml', '20200501.mn', '20200501.mr', '20200501.mrj', '20200501.ms', '20200501.mt', '20200501.mus', '20200501.mwl', '20200501.my', '20200501.myv', '20200501.mzn', '20200501.na', '20200501.nah', '20200501.nap', '20200501.nds', '20200501.nds-nl', '20200501.ne', '20200501.new', '20200501.ng', '20200501.nl', '20200501.nn', '20200501.no', '20200501.nov', '20200501.nrm', '20200501.nso', '20200501.nv', '20200501.ny', '20200501.oc', '20200501.olo', '20200501.om', '20200501.or', '20200501.os', '20200501.pa', '20200501.pag', '20200501.pam', '20200501.pap', '20200501.pcd', '20200501.pdc', '20200501.pfl', '20200501.pi', '20200501.pih', '20200501.pl', '20200501.pms', '20200501.pnb', '20200501.pnt', '20200501.ps', '20200501.pt', '20200501.qu', '20200501.rm', '20200501.rmy', '20200501.rn', '20200501.ro', '20200501.roa-rup', '20200501.roa-tara', '20200501.ru', '20200501.rue', '20200501.rw', '20200501.sa', '20200501.sah', '20200501.sat', '20200501.sc', '20200501.scn', '20200501.sco', '20200501.sd', '20200501.se', '20200501.sg', '20200501.sh', '20200501.si', '20200501.simple', '20200501.sk', '20200501.sl', '20200501.sm', '20200501.sn', '20200501.so', '20200501.sq', '20200501.sr', '20200501.srn', '20200501.ss', '20200501.st', '20200501.stq', '20200501.su', '20200501.sv', '20200501.sw', '20200501.szl', '20200501.ta', '20200501.tcy', '20200501.te', '20200501.tet', '20200501.tg', '20200501.th', '20200501.ti', '20200501.tk', '20200501.tl', '20200501.tn', '20200501.to', '20200501.tpi', '20200501.tr', '20200501.ts', '20200501.tt', '20200501.tum', '20200501.tw', '20200501.ty', '20200501.tyv', '20200501.udm', '20200501.ug', '20200501.uk', '20200501.ur', '20200501.uz', '20200501.ve', '20200501.vec', '20200501.vep', '20200501.vi', '20200501.vls', '20200501.vo', '20200501.wa', '20200501.war', '20200501.wo', '20200501.wuu', '20200501.xal', '20200501.xh', '20200501.xmf', '20200501.yi', '20200501.yo', '20200501.za', '20200501.zea', '20200501.zh', '20200501.zh-classical', '20200501.zh-min-nan', '20200501.zh-yue', '20200501.zu']
```
The cached datasets:
```
% aws s3 --no-sign-request --endpoint-url https://storage.googleapis.com ls s3://huggingface-nlp/cache/datasets/wikipedia/
PRE 20200501.de/
PRE 20200501.en/
PRE 20200501.fr/
PRE 20200501.frr/
PRE 20200501.it/
PRE 20200501.simple/
```
|
OPEN
| 2021-04-06T03:13:18
| 2021-06-16T01:10:50
| null |
https://github.com/huggingface/datasets/issues/2170
|
leezu
| 1
|
[] |
2,167
|
Split type not preserved when reloading the dataset
|
A minimal reproducible example:
```python
>>> from datasets import load_dataset, Dataset
>>> dset = load_dataset("sst", split="train")
>>> dset.save_to_disk("sst")
>>> type(dset.split)
<class 'datasets.splits.NamedSplit'>
>>> dset = Dataset.load_from_disk("sst")
>>> type(dset.split) # NamedSplit expected
<class 'str'>
```
It seems like this bug was introduced in #2025.
|
CLOSED
| 2021-04-04T19:29:54
| 2021-04-19T09:08:55
| 2021-04-19T09:08:55
|
https://github.com/huggingface/datasets/issues/2167
|
mariosasko
| 0
|
[] |
2,166
|
Regarding Test Sets for the GEM datasets
|
@yjernite Hi, are the test sets for the GEM datasets scheduled to be [added soon](https://gem-benchmark.com/shared_task)?
e.g.
```
from datasets import load_dataset
DATASET_NAME="common_gen"
data = load_dataset("gem", DATASET_NAME)
```
The test set doesn't have the target or references.
```
data['test'][0]
{'concept_set_id': 0, 'concepts': ['drill', 'field', 'run', 'team'], 'gem_id': 'common_gen-test-0', 'gem_parent_id': 'common_gen-test-0', 'references': [], 'target': ''}
```
|
CLOSED
| 2021-04-04T02:02:45
| 2021-04-06T08:13:12
| 2021-04-06T08:13:12
|
https://github.com/huggingface/datasets/issues/2166
|
vyraun
| 2
|
[
"Dataset discussion"
] |
2,165
|
How to convert datasets.arrow_dataset.Dataset to torch.utils.data.Dataset
|
Hi,
I'm trying to pretraine deep-speed model using HF arxiv dataset like:
```
train_ds = nlp.load_dataset('scientific_papers', 'arxiv')
train_ds.set_format(
type="torch",
columns=["input_ids", "attention_mask", "global_attention_mask", "labels"],
)
engine, _, _, _ = deepspeed.initialize(
args=args,
model=model,
model_parameters=[p for p in model.parameters() if p.requires_grad],
training_data=train_ds)
```
but deepspeed.initialize accepts torch.utils.data.Dataset only. How can I convert HF-style dataset to torch-style dataset?
|
CLOSED
| 2021-04-04T01:01:48
| 2021-08-24T15:55:35
| 2021-04-07T15:06:04
|
https://github.com/huggingface/datasets/issues/2165
|
y-rokutan
| 7
|
[] |
2,162
|
visualization for cc100 is broken
|
Hi
visualization through dataset viewer for cc100 is broken
https://huggingface.co/datasets/viewer/
thanks a lot
|
CLOSED
| 2021-04-02T10:11:13
| 2022-10-05T13:20:24
| 2022-10-05T13:20:24
|
https://github.com/huggingface/datasets/issues/2162
|
dorost1234
| 3
|
[
"nlp-viewer"
] |
2,161
|
any possibility to download part of large datasets only?
|
Hi
Some of the datasets I need like cc100 are very large, and then I wonder if I can download first X samples of the shuffled/unshuffled data without going through first downloading the whole data then sampling? thanks
|
CLOSED
| 2021-04-02T10:06:46
| 2022-10-05T13:26:51
| 2022-10-05T13:26:51
|
https://github.com/huggingface/datasets/issues/2161
|
dorost1234
| 6
|
[] |
2,160
|
data_args.preprocessing_num_workers almost freezes
|
Hi @lhoestq
I am running this code from huggingface transformers https://github.com/huggingface/transformers/blob/master/examples/language-modeling/run_mlm.py
to speed up tokenization, since I am running on multiple datasets, I am using data_args.preprocessing_num_workers = 4 with opus100 corpus but this moves on till a point and then this freezes almost for sometime during tokenization steps and then this is back again, overall to me taking more time than normal case, I appreciate your advice on how I can use this option properly to speed up.
thanks
|
CLOSED
| 2021-04-02T07:56:13
| 2021-04-02T10:14:32
| 2021-04-02T10:14:31
|
https://github.com/huggingface/datasets/issues/2160
|
dorost1234
| 2
|
[] |
2,159
|
adding ccnet dataset
|
## Adding a Dataset
- **Name:** ccnet
- **Description:**
Common Crawl
- **Paper:**
https://arxiv.org/abs/1911.00359
- **Data:**
https://github.com/facebookresearch/cc_net
- **Motivation:**
this is one of the most comprehensive clean monolingual datasets across a variety of languages. Quite important for cross-lingual reseach
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
thanks
|
CLOSED
| 2021-04-01T23:28:36
| 2021-04-02T10:05:19
| 2021-04-02T10:05:19
|
https://github.com/huggingface/datasets/issues/2159
|
dorost1234
| 1
|
[
"dataset request"
] |
2,158
|
viewer "fake_news_english" error
|
When I visit the [Huggingface - viewer](https://huggingface.co/datasets/viewer/) web site, under the dataset "fake_news_english" I've got this error:
> ImportError: To be able to use this dataset, you need to install the following dependencies['openpyxl'] using 'pip install # noqa: requires this pandas optional dependency for reading xlsx files' for instance'
as well as the error Traceback.
|
CLOSED
| 2021-04-01T14:13:20
| 2022-10-05T13:22:02
| 2022-10-05T13:22:02
|
https://github.com/huggingface/datasets/issues/2158
|
emanuelevivoli
| 2
|
[
"nlp-viewer"
] |
2,153
|
load_dataset ignoring features
|
First of all, I'm sorry if it is a repeated issue or the changes are already in master, I searched and I didn't find anything.
I'm using datasets 1.5.0
As you can see, when I load the dataset, the ClassLabels are ignored, I have to cast the dataset in order to make it work.
Code to reproduce:
```python
import datasets
data_location = "/data/prueba_multiclase"
features = datasets.Features(
{"texto": datasets.Value("string"), "label": datasets.features.ClassLabel(names=["false", "true"])}
)
dataset = datasets.load_dataset(
"csv", data_files=data_location, delimiter="\t", features=features
)
```
Dataset I used:
[prueba_multiclase.zip](https://github.com/huggingface/datasets/files/6235022/prueba_multiclase.zip) (it has to be unzipped)
Thank you! ❤️
|
CLOSED
| 2021-03-31T08:30:09
| 2022-10-05T13:29:12
| 2022-10-05T13:29:12
|
https://github.com/huggingface/datasets/issues/2153
|
GuillemGSubies
| 3
|
[
"bug"
] |
2,149
|
Telugu subset missing for xtreme tatoeba dataset
|
from nlp import load_dataset
train_dataset = load_dataset('xtreme', 'tatoeba.tel')['validation']
ValueError: BuilderConfig tatoeba.tel not found.
but language tel is actually included in xtreme:
https://github.com/google-research/xtreme/blob/master/utils_preprocess.py
def tatoeba_preprocess(args):
lang3_dict = {
'afr':'af', 'ara':'ar', 'bul':'bg', 'ben':'bn',
'deu':'de', 'ell':'el', 'spa':'es', 'est':'et',
'eus':'eu', 'pes':'fa', 'fin':'fi', 'fra':'fr',
'heb':'he', 'hin':'hi', 'hun':'hu', 'ind':'id',
'ita':'it', 'jpn':'ja', 'jav':'jv', 'kat':'ka',
'kaz':'kk', 'kor':'ko', 'mal':'ml', 'mar':'mr',
'nld':'nl', 'por':'pt', 'rus':'ru', 'swh':'sw',
'tam':'ta', **_'tel':'te'_**, 'tha':'th', 'tgl':'tl', <----here
'tur':'tr', 'urd':'ur', 'vie':'vi', 'cmn':'zh',
'eng':'en',
}
|
CLOSED
| 2021-03-30T15:26:34
| 2022-10-05T13:28:30
| 2022-10-05T13:28:30
|
https://github.com/huggingface/datasets/issues/2149
|
cosmeowpawlitan
| 2
|
[] |
2,148
|
Add configurable options to `seqeval` metric
|
Right now `load_metric("seqeval")` only works in the default mode of evaluation (equivalent to conll evaluation).
However, seqeval library [supports](https://github.com/chakki-works/seqeval#support-features) different evaluation schemes (IOB1, IOB2, etc.), which can be plugged in just by supporting additional kwargs in `Seqeval._compute`
https://github.com/huggingface/datasets/blob/85cf7ff920c90ca2e12bedca12b36d2a043c3da2/metrics/seqeval/seqeval.py#L109
Things that would be relevant are, for example, supporting `mode="strict", scheme=IOB2` to count only full entity match as a true positive and omit partial matches.
The only problem I see is that the spirit of `metrics` seems to not require additional imports from user. `seqeval` only supports schemes as objects, without any string aliases.
It can be solved naively with mapping like `{"IOB2": seqeval.scheme.IOB2}`. Or just left as is and require user to explicitly import scheme from `seqeval` if he wants to configure it past the default implementation.
If that makes sense, I am happy to implement the change.
|
CLOSED
| 2021-03-30T15:04:06
| 2021-04-15T13:49:46
| 2021-04-15T13:49:46
|
https://github.com/huggingface/datasets/issues/2148
|
marrodion
| 1
|
[] |
2,146
|
Dataset file size on disk is very large with 3D Array
|
Hi,
I have created my own dataset using the provided dataset loading script. It is an image dataset where images are stored as 3D Array with dtype=uint8.
The actual size on disk is surprisingly large. It takes 520 MB. Here is some info from `dataset_info.json`.
`{
"description": "",
"citation": "",
"homepage": "",
"license": "",
"features": {
"image": {
"shape": [224, 224, 3],
"dtype": "uint8",
"id": null,
"_type": "Array3D",
}
},
"post_processed": null,
"supervised_keys": null,
"builder_name": "shot_type_image_dataset",
"config_name": "default",
"version": {
"version_str": "0.0.0",
"description": null,
"major": 0,
"minor": 0,
"patch": 0,
},
"splits": {
"train": {
"name": "train",
"num_bytes": 520803408,
"num_examples": 1479,
"dataset_name": "shot_type_image_dataset",
}
},
"download_checksums": {
"": {
"num_bytes": 16940447118,
"checksum": "5854035705efe08b0ed8f3cf3da7b4d29cba9055c2d2d702c79785350d72ee03",
}
},
"download_size": 16940447118,
"post_processing_size": null,
"dataset_size": 520803408,
"size_in_bytes": 17461250526,
}`
I have created the same dataset with tensorflow_dataset and it takes only 125MB on disk.
I am wondering, is it normal behavior ? I understand `Datasets` uses Arrow for serialization wheres tf uses TF Records.
This might be a problem for large dataset.
Thanks for your help.
|
OPEN
| 2021-03-30T14:46:09
| 2021-04-16T13:07:02
| null |
https://github.com/huggingface/datasets/issues/2146
|
jblemoine
| 6
|
[] |
2,144
|
Loading wikipedia 20200501.en throws pyarrow related error
|
**Problem description**
I am getting the following error when trying to load wikipedia/20200501.en dataset.
**Error log**
Downloading and preparing dataset wikipedia/20200501.en (download: 16.99 GiB, generated: 17.07 GiB, post-processed: Unknown size, total: 34.06 GiB) to /usr/local/workspace/NAS_NLP/cache/wikipedia/20200501.en/1.0.0/50aa706aa417bb77d910ad61211cc672c0ef3e0f224225a5e0a18277ade8b931...
Downloading: 100%|██████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████████| 14.6k/14.6k [00:00<00:00, 5.41MB/s]
Downloading: 59%|███████████████████████████████████████████████████████████████████████████████████████▊ | 10.7G/18.3G [11:30<08:08, 15.5MB/s]
Dataset wikipedia downloaded and prepared to /usr/local/workspace/NAS_NLP/cache/wikipedia/20200501.en/1.0.0/50aa706aa417bb77d910ad61211cc672c0ef3e0f224225a5e0a18277ade8b931. Subsequent calls will reuse this data.
Traceback (most recent call last):
File "load_wiki.py", line 2, in <module>
ds = load_dataset('wikipedia', '20200501.en', cache_dir='/usr/local/workspace/NAS_NLP/cache')
File "/usr/local/lib/python3.6/dist-packages/datasets/load.py", line 751, in load_dataset
ds = builder_instance.as_dataset(split=split, ignore_verifications=ignore_verifications, in_memory=keep_in_memory)
File "/usr/local/lib/python3.6/dist-packages/datasets/builder.py", line 746, in as_dataset
map_tuple=True,
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/py_utils.py", line 204, in map_nested
_single_map_nested((function, obj, types, None, True)) for obj in tqdm(iterable, disable=disable_tqdm)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/py_utils.py", line 204, in <listcomp>
_single_map_nested((function, obj, types, None, True)) for obj in tqdm(iterable, disable=disable_tqdm)
File "/usr/local/lib/python3.6/dist-packages/datasets/utils/py_utils.py", line 142, in _single_map_nested
return function(data_struct)
File "/usr/local/lib/python3.6/dist-packages/datasets/builder.py", line 763, in _build_single_dataset
in_memory=in_memory,
File "/usr/local/lib/python3.6/dist-packages/datasets/builder.py", line 835, in _as_dataset
in_memory=in_memory,
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 215, in read
return self.read_files(files=files, original_instructions=instructions, in_memory=in_memory)
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 236, in read_files
pa_table = self._read_files(files, in_memory=in_memory)
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 171, in _read_files
pa_table: pa.Table = self._get_dataset_from_filename(f_dict, in_memory=in_memory)
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 302, in _get_dataset_from_filename
pa_table = ArrowReader.read_table(filename, in_memory=in_memory)
File "/usr/local/lib/python3.6/dist-packages/datasets/arrow_reader.py", line 324, in read_table
pa_table = f.read_all()
File "pyarrow/ipc.pxi", line 544, in pyarrow.lib.RecordBatchReader.read_all
File "pyarrow/error.pxi", line 99, in pyarrow.lib.check_status
OSError: Expected to be able to read 9176784 bytes for message body, got 4918712
**Detailed version info**
datasets==1.5.0
- dataclasses [required: Any, installed: 0.8]
- dill [required: Any, installed: 0.3.3]
- fsspec [required: Any, installed: 0.8.7]
- importlib-metadata [required: Any, installed: 1.7.0]
- zipp [required: >=0.5, installed: 3.1.0]
- huggingface-hub [required: <0.1.0, installed: 0.0.7]
- filelock [required: Any, installed: 3.0.12]
- importlib-metadata [required: Any, installed: 1.7.0]
- zipp [required: >=0.5, installed: 3.1.0]
- requests [required: Any, installed: 2.24.0]
- certifi [required: >=2017.4.17, installed: 2020.6.20]
- chardet [required: >=3.0.2,<4, installed: 3.0.4]
- idna [required: >=2.5,<3, installed: 2.6]
- urllib3 [required: >=1.21.1,<1.26,!=1.25.1,!=1.25.0, installed: 1.25.10]
- tqdm [required: Any, installed: 4.49.0]
- importlib-metadata [required: Any, installed: 1.7.0]
- zipp [required: >=0.5, installed: 3.1.0]
- multiprocess [required: Any, installed: 0.70.11.1]
- dill [required: >=0.3.3, installed: 0.3.3]
- numpy [required: >=1.17, installed: 1.17.0]
- pandas [required: Any, installed: 1.1.5]
- numpy [required: >=1.15.4, installed: 1.17.0]
- python-dateutil [required: >=2.7.3, installed: 2.8.0]
- six [required: >=1.5, installed: 1.15.0]
- pytz [required: >=2017.2, installed: 2020.1]
- pyarrow [required: >=0.17.1, installed: 3.0.0]
- numpy [required: >=1.16.6, installed: 1.17.0]
- requests [required: >=2.19.0, installed: 2.24.0]
- certifi [required: >=2017.4.17, installed: 2020.6.20]
- chardet [required: >=3.0.2,<4, installed: 3.0.4]
- idna [required: >=2.5,<3, installed: 2.6]
- urllib3 [required: >=1.21.1,<1.26,!=1.25.1,!=1.25.0, installed: 1.25.10]
- tqdm [required: >=4.27,<4.50.0, installed: 4.49.0]
- xxhash [required: Any, installed: 2.0.0]
|
OPEN
| 2021-03-30T10:38:31
| 2021-04-01T09:21:17
| null |
https://github.com/huggingface/datasets/issues/2144
|
TomPyonsuke
| 6
|
[] |
2,139
|
TypeError when using save_to_disk in a dataset loaded with ReadInstruction split
|
Hi,
Loading a dataset with `load_dataset` using a split defined via `ReadInstruction` and then saving it to disk results in the following error: `TypeError: Object of type ReadInstruction is not JSON serializable`.
Here is the minimal reproducible example:
```python
from datasets import load_dataset
from datasets import ReadInstruction
data_1 = load_dataset(
"wikiann",
"en",
split="validation",
)
data_1.save_to_disk("temporary_path_1")
print("Save with regular split works.")
data_2 = load_dataset(
"wikiann",
"en",
split=ReadInstruction("validation", to=50, unit="%"),
)
data_2.save_to_disk("temporary_path_2")
```
and the corresponding output:
```
Reusing dataset wikiann (/xxxxx/.cache/huggingface/datasets/wikiann/en/1.1.0/0b11a6fb31eea02f38ca17610657bfba3206100685283014daceb8da291c3be9)
Save with regular split works.
Reusing dataset wikiann (/xxxxx/.cache/huggingface/datasets/wikiann/en/1.1.0/0b11a6fb31eea02f38ca17610657bfba3206100685283014daceb8da291c3be9)
Traceback (most recent call last):
File "bug.py", line 20, in <module>
data_2.save_to_disk("temporary_path_2")
File "/xxxxx/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 645, in save_to_disk
json.dump(state, state_file, indent=2, sort_keys=True)
File "/usr/lib/python3.7/json/__init__.py", line 179, in dump
for chunk in iterable:
File "/usr/lib/python3.7/json/encoder.py", line 431, in _iterencode
yield from _iterencode_dict(o, _current_indent_level)
File "/usr/lib/python3.7/json/encoder.py", line 405, in _iterencode_dict
yield from chunks
File "/usr/lib/python3.7/json/encoder.py", line 438, in _iterencode
o = _default(o)
File "/usr/lib/python3.7/json/encoder.py", line 179, in default
raise TypeError(f'Object of type {o.__class__.__name__} '
TypeError: Object of type ReadInstruction is not JSON serializable
```
Let me know if there is some misuse from my end.
Thanks in advance.
|
CLOSED
| 2021-03-29T18:23:54
| 2021-03-30T09:12:53
| 2021-03-30T09:12:53
|
https://github.com/huggingface/datasets/issues/2139
|
PedroMLF
| 2
|
[] |
2,135
|
en language data from MLQA dataset is missing
|
Hi
I need mlqa-translate-train.en dataset, but it is missing from the MLQA dataset. could you have a look please? @lhoestq thank you for your help to fix this issue.
|
CLOSED
| 2021-03-29T10:47:50
| 2021-03-30T10:20:23
| 2021-03-30T10:20:23
|
https://github.com/huggingface/datasets/issues/2135
|
rabeehk
| 3
|
[] |
2,134
|
Saving large in-memory datasets with save_to_disk crashes because of pickling
|
Using Datasets 1.5.0 on Python 3.7.
Recently I've been working on medium to large size datasets (pretokenized raw text sizes from few gigabytes to low tens of gigabytes), and have found out that several preprocessing steps are massively faster when done in memory, and I have the ability to requisition a lot of RAM, so I decided to do these steps completely out of the datasets library.
So my workflow is to do several .map() on datasets object, then for the operation which is faster in memory to extract the necessary columns from the dataset and then drop it whole, do the transformation in memory, and then create a fresh Dataset object using .from_dict() or other method.
When I then try to call save_to_disk(path) on the dataset, it crashes because of pickling, which appears to be because of using old pickle protocol which doesn't support large files (over 4 GiB).
```
Traceback (most recent call last):
File "./tokenize_and_chunkify_in_memory.py", line 80, in <module>
main()
File "./tokenize_and_chunkify_in_memory.py", line 75, in main
tokenize_and_chunkify(config)
File "./tokenize_and_chunkify_in_memory.py", line 60, in tokenize_and_chunkify
contexts_dataset.save_to_disk(chunked_path)
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 457, in save_to_disk
self = pickle.loads(pickle.dumps(self))
OverflowError: cannot serialize a bytes object larger than 4 GiB
```
From what I've seen this issue may be possibly fixed, as the line `self = pickle.loads(pickle.dumps(self))` does not appear to be present in the current state of the repository.
To save these datasets to disk, I've resorted to calling .map() over them with `function=None` and specifying the .arrow cache file, and then creating a new dataset using the .from_file() method, which I can then safely save to disk.
Additional issue when working with these large in-memory datasets is when using multiprocessing, is again to do with pickling. I've tried to speed up the mapping with function=None by specifying num_proc to the available cpu count, and I again get issues with transferring the dataset, with the following traceback. I am not sure if I should open a separate issue for that.
```
Traceback (most recent call last):
File "./tokenize_and_chunkify_in_memory.py", line 94, in <module>
main()
File "./tokenize_and_chunkify_in_memory.py", line 89, in main
tokenize_and_chunkify(config)
File "./tokenize_and_chunkify_in_memory.py", line 67, in tokenize_and_chunkify
contexts_dataset.map(function=None, cache_file_name=str(output_dir_path / "tmp.arrow"), writer_batch_size=50000, num_proc=config.threads)
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1485, in map
transformed_shards = [r.get() for r in results]
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1485, in <listcomp>
transformed_shards = [r.get() for r in results]
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/pool.py", line 657, in get
raise self._value
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/pool.py", line 431, in _handle_tasks
put(task)
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/connection.py", line 209, in send
self._send_bytes(_ForkingPickler.dumps(obj))
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/reduction.py", line 54, in dumps
cls(buf, protocol, *args, **kwds).dump(obj)
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/dill/_dill.py", line 454, in dump
StockPickler.dump(self, obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 437, in dump
self.save(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/dill/_dill.py", line 941, in save_module_dict
StockPickler.save_dict(pickler, obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 859, in save_dict
self._batch_setitems(obj.items())
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 885, in _batch_setitems
save(v)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 662, in save_reduce
save(state)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/dill/_dill.py", line 941, in save_module_dict
StockPickler.save_dict(pickler, obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 859, in save_dict
self._batch_setitems(obj.items())
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 885, in _batch_setitems
save(v)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 843, in _batch_appends
save(x)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 846, in _batch_appends
save(tmp[0])
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 846, in _batch_appends
save(tmp[0])
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 846, in _batch_appends
save(tmp[0])
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 843, in _batch_appends
save(x)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 732, in save_bytes
self._write_large_bytes(BINBYTES + pack("<I", n), obj)
struct.error: 'I' format requires 0 <= number <= 4294967295Traceback (most recent call last):
File "./tokenize_and_chunkify_in_memory.py", line 94, in <module>
main()
File "./tokenize_and_chunkify_in_memory.py", line 89, in main
tokenize_and_chunkify(config)
File "./tokenize_and_chunkify_in_memory.py", line 67, in tokenize_and_chunkify
contexts_dataset.map(function=None, cache_file_name=str(output_dir_path / "tmp.arrow"), writer_batch_size=50000, num_proc=config.threads)
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1485, in map
transformed_shards = [r.get() for r in results]
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1485, in <listcomp>
transformed_shards = [r.get() for r in results]
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/pool.py", line 657, in get
raise self._value
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/pool.py", line 431, in _handle_tasks
put(task)
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/connection.py", line 209, in send
self._send_bytes(_ForkingPickler.dumps(obj))
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/multiprocess/reduction.py", line 54, in dumps
cls(buf, protocol, *args, **kwds).dump(obj)
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/dill/_dill.py", line 454, in dump
StockPickler.dump(self, obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 437, in dump
self.save(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/dill/_dill.py", line 941, in save_module_dict
StockPickler.save_dict(pickler, obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 859, in save_dict
self._batch_setitems(obj.items())
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 885, in _batch_setitems
save(v)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 662, in save_reduce
save(state)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/home/cernypro/dev/envs/huggingface_gpu/lib/python3.7/site-packages/dill/_dill.py", line 941, in save_module_dict
StockPickler.save_dict(pickler, obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 859, in save_dict
self._batch_setitems(obj.items())
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 885, in _batch_setitems
save(v)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 843, in _batch_appends
save(x)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 846, in _batch_appends
save(tmp[0])
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 846, in _batch_appends
save(tmp[0])
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 846, in _batch_appends
save(tmp[0])
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 789, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 819, in save_list
self._batch_appends(obj)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 843, in _batch_appends
save(x)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 549, in save
self.save_reduce(obj=obj, *rv)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 638, in save_reduce
save(args)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 774, in save_tuple
save(element)
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 504, in save
f(self, obj) # Call unbound method with explicit self
File "/mnt/appl/software/Python/3.7.4-GCCcore-8.3.0/lib/python3.7/pickle.py", line 732, in save_bytes
self._write_large_bytes(BINBYTES + pack("<I", n), obj)
struct.error: 'I' format requires 0 <= number <= 4294967295
```
|
CLOSED
| 2021-03-29T10:43:15
| 2021-05-03T17:59:21
| 2021-05-03T17:59:21
|
https://github.com/huggingface/datasets/issues/2134
|
prokopCerny
| 6
|
[
"bug"
] |
2,133
|
bug in mlqa dataset
|
Hi
Looking into MLQA dataset for langauge "ar":
```
"question": [
"\u0645\u062a\u0649 \u0628\u062f\u0627\u062a \u0627\u0644\u0645\u062c\u0644\u0629 \u0627\u0644\u0645\u062f\u0631\u0633\u064a\u0629 \u0641\u064a \u0646\u0648\u062a\u0631\u062f\u0627\u0645 \u0628\u0627\u0644\u0646\u0634\u0631?",
"\u0643\u0645 \u0645\u0631\u0629 \u064a\u062a\u0645 \u0646\u0634\u0631\u0647\u0627 \u0641\u064a \u0646\u0648\u062a\u0631\u062f\u0627\u0645?",
"\u0645\u0627 \u0647\u064a \u0627\u0644\u0648\u0631\u0642\u0629 \u0627\u0644\u064a\u0648\u0645\u064a\u0629 \u0644\u0644\u0637\u0644\u0627\u0628 \u0641\u064a \u0646\u0648\u062a\u0631\u062f\u0627\u0645?",
"\u0643\u0645 \u0639\u062f\u062f \u0627\u0644\u0627\u0648\u0631\u0627\u0642 \u0627\u0644\u0627\u062e\u0628\u0627\u0631\u064a\u0629 \u0644\u0644\u0637\u0644\u0627\u0628 \u0627\u0644\u062a\u064a \u0648\u062c\u062f\u062a \u0641\u064a \u0646\u0648\u062a\u0631\u062f\u0627\u0645?",
"\u0641\u064a \u0627\u064a \u0633\u0646\u0629 \u0628\u062f\u0627\u062a \u0648\u0631\u0642\u0629 \u0627\u0644\u0637\u0627\u0644\u0628 \u0627\u0644\u062d\u0633 \u0627\u0644\u0633\u0644\u064a\u0645 \u0628\u0627\u0644\u0646\u0634\u0631 \u0641\u064a \u0646\u0648\u062a\u0631\u062f\u0627\u0645?"
]
```
the questions are in the wrong format, and not readable, could you please have a look? thanks @lhoestq
|
CLOSED
| 2021-03-29T09:03:09
| 2021-03-30T17:40:57
| 2021-03-30T17:40:57
|
https://github.com/huggingface/datasets/issues/2133
|
dorost1234
| 3
|
[] |
2,132
|
TydiQA dataset is mixed and is not split per language
|
Hi @lhoestq
Currently TydiQA is mixed and user can only access the whole training set of all languages:
https://www.tensorflow.org/datasets/catalog/tydi_qa
for using this dataset, one need to train/evaluate in each separate language, and having them mixed, makes it hard to use this dataset. This is much convenient for user to have them split and I appreciate your help on this.
Meanwhile, till hopefully this is split per language, I greatly appreciate telling me how I can preprocess and get data per language. thanks a lot
|
OPEN
| 2021-03-29T08:56:21
| 2021-04-04T09:57:15
| null |
https://github.com/huggingface/datasets/issues/2132
|
dorost1234
| 3
|
[] |
2,131
|
When training with Multi-Node Multi-GPU the worker 2 has TypeError: 'NoneType' object
|
version: 1.5.0
met a very strange error, I am training large scale language model, and need train on 2 machines(workers).
And sometimes I will get this error `TypeError: 'NoneType' object is not iterable`
This is traceback
```
71 | | Traceback (most recent call last):
-- | -- | --
72 | | File "run_gpt.py", line 316, in <module>
73 | | main()
74 | | File "run_gpt.py", line 222, in main
75 | | delimiter="\t", column_names=["input_ids", "attention_mask", "chinese_ref"])
76 | | File "/data/miniconda3/lib/python3.7/site-packages/datasets/load.py", line 747, in load_dataset
77 | | use_auth_token=use_auth_token,
78 | | File "/data/miniconda3/lib/python3.7/site-packages/datasets/builder.py", line 513, in download_and_prepare
79 | | self.download_post_processing_resources(dl_manager)
80 | | File "/data/miniconda3/lib/python3.7/site-packages/datasets/builder.py", line 673, in download_post_processing_resources
81 | | for split in self.info.splits:
82 | | TypeError: 'NoneType' object is not iterable
83 | | WARNING:datasets.builder:Reusing dataset csv (/usr/local/app/.cache/huggingface/datasets/csv/default-1c257ebd48e225e7/0.0.0/2960f95a26e85d40ca41a230ac88787f715ee3003edaacb8b1f0891e9f04dda2)
84 | | Traceback (most recent call last):
85 | | File "/data/miniconda3/lib/python3.7/runpy.py", line 193, in _run_module_as_main
86 | | "__main__", mod_spec)
87 | | File "/data/miniconda3/lib/python3.7/runpy.py", line 85, in _run_code
88 | | exec(code, run_globals)
89 | | File "/data/miniconda3/lib/python3.7/site-packages/torch/distributed/launch.py", line 340, in <module>
90 | | main()
91 | | File "/data/miniconda3/lib/python3.7/site-packages/torch/distributed/launch.py", line 326, in main
92 | | sigkill_handler(signal.SIGTERM, None) # not coming back
93 | | File "/data/miniconda3/lib/python3.7/site-packages/torch/distributed/launch.py", line 301, in sigkill_handler
94 | | raise subprocess.CalledProcessError(returncode=last_return_code, cmd=cmd)
```
On worker 1 it loads the dataset well, however on worker 2 will get this error.
And I will meet this error from time to time, sometimes it just goes well.
|
CLOSED
| 2021-03-29T08:45:58
| 2021-04-10T11:08:55
| 2021-04-10T11:08:55
|
https://github.com/huggingface/datasets/issues/2131
|
andy-yangz
| 3
|
[
"bug"
] |
2,130
|
wikiann dataset is missing columns
|
Hi
Wikiann dataset needs to have "spans" columns, which is necessary to be able to use this dataset, but this column is missing from huggingface datasets, could you please have a look? thank you @lhoestq
|
CLOSED
| 2021-03-29T08:23:00
| 2021-08-27T14:44:18
| 2021-08-27T14:44:18
|
https://github.com/huggingface/datasets/issues/2130
|
dorost1234
| 5
|
[
"good first issue"
] |
2,129
|
How to train BERT model with next sentence prediction?
|
Hello.
I'm trying to pretrain the BERT model with next sentence prediction. Is there any function that supports next sentence prediction
like ` TextDatasetForNextSentencePrediction` of `huggingface/transformers` ?
|
CLOSED
| 2021-03-29T06:48:03
| 2021-04-01T04:58:40
| 2021-04-01T04:58:40
|
https://github.com/huggingface/datasets/issues/2129
|
jnishi
| 4
|
[] |
2,128
|
Dialogue action slot name and value are reversed in MultiWoZ 2.2
|
Hi @yjernite, thank you for adding MultiWoZ 2.2 in the huggingface datasets platform. It is beneficial!
I spot an error that the order of Dialogue action slot names and values are reversed.
https://github.com/huggingface/datasets/blob/649b2c469779bc4221e1b6969aa2496d63eb5953/datasets/multi_woz_v22/multi_woz_v22.py#L251-L262
|
CLOSED
| 2021-03-29T06:34:02
| 2021-03-31T12:48:01
| 2021-03-31T12:48:01
|
https://github.com/huggingface/datasets/issues/2128
|
adamlin120
| 1
|
[
"dataset bug"
] |
2,125
|
Is dataset timit_asr broken?
|
Using `timit_asr` dataset, I saw all records are the same.
``` python
from datasets import load_dataset, load_metric
timit = load_dataset("timit_asr")
from datasets import ClassLabel
import random
import pandas as pd
from IPython.display import display, HTML
def show_random_elements(dataset, num_examples=10):
assert num_examples <= len(dataset), "Can't pick more elements than there are in the dataset."
picks = []
for _ in range(num_examples):
pick = random.randint(0, len(dataset)-1)
while pick in picks:
pick = random.randint(0, len(dataset)-1)
picks.append(pick)
df = pd.DataFrame(dataset[picks])
display(HTML(df.to_html()))
show_random_elements(timit['train'].remove_columns(["file", "phonetic_detail", "word_detail", "dialect_region", "id",
"sentence_type", "speaker_id"]), num_examples=20)
```
`output`
<img width="312" alt="Screen Shot 2021-03-28 at 17 29 04" src="https://user-images.githubusercontent.com/42398050/112746646-21acee80-8feb-11eb-84f3-dbb5d4269724.png">
I double-checked it [here](https://huggingface.co/datasets/viewer/), and met the same problem.
<img width="1374" alt="Screen Shot 2021-03-28 at 17 32 07" src="https://user-images.githubusercontent.com/42398050/112746698-9bdd7300-8feb-11eb-97ed-5babead385f4.png">
|
CLOSED
| 2021-03-28T08:30:18
| 2021-03-28T12:29:25
| 2021-03-28T12:29:25
|
https://github.com/huggingface/datasets/issues/2125
|
kosuke-kitahara
| 2
|
[] |
2,124
|
Adding ScaNN library to do MIPS?
|
@lhoestq Hi I am thinking of adding this new google library to do the MIPS similar to **add_faiss_idex**. As the paper suggests, it is really fast when it comes to retrieving the nearest neighbors.
https://github.com/google-research/google-research/tree/master/scann
|
OPEN
| 2021-03-28T00:07:00
| 2021-03-29T13:23:43
| null |
https://github.com/huggingface/datasets/issues/2124
|
shamanez
| 1
|
[] |
2,123
|
Problem downloading GEM wiki_auto_asset_turk dataset
|
@yjernite
### Summary
I am currently working on the GEM datasets and do not manage to download the wiki_auto_asset_turk data, whereas all other datasets download well with the same code.
### Steps to reproduce
Code snippet:
from datasets import load_dataset
#dataset = load_dataset('gem', 'web_nlg_en')
dataset = load_dataset('gem', 'wiki_auto_asset_turk')
```
**Expected behavior:**
I expect the dataset to start downloading (download bar appears and progresses toward 100%)
**Actual behavior:**
Instead of seeing the download bar appearing, nothing happens; the following appears in the console as expected, but nothing more:
Downloading: 36.6kB [00:00, 37.2MB/s]
Downloading: 41.7kB [00:00, ?B/s]
Downloading and preparing dataset gem/wiki_auto_asset_turk (download: 121.37 MiB, generated: 145.69 MiB, post-processed: Unknown size, total: 267.07 MiB) to C:\Users\sfmil\.cache\huggingface\datasets\gem\wiki_auto_asset_turk\1.0.0\f252756d7f1b8f019aac71a1623b2950acfe10d25d956668ac4eae4e93c58b8d...
### Is this a regression?
No, it was the first time I was trying to download this dataset (same for the other ones).
### Debug info
- Python version: Python 3.8.2
- OS version: Windows 10 Family
|
CLOSED
| 2021-03-27T18:41:28
| 2021-05-12T16:15:18
| 2021-05-12T16:15:17
|
https://github.com/huggingface/datasets/issues/2123
|
mille-s
| 5
|
[] |
2,120
|
dataset viewer does not work anymore
|
Hi
I normally use this link to see all datasets and how I can load them
https://huggingface.co/datasets/viewer/
Now I am getting
502 Bad Gateway
nginx/1.18.0 (Ubuntu)
could you bring this webpage back ? this was very helpful @lhoestq
thanks for your help
|
CLOSED
| 2021-03-26T13:22:13
| 2021-03-26T15:52:22
| 2021-03-26T15:52:22
|
https://github.com/huggingface/datasets/issues/2120
|
dorost1234
| 2
|
[
"nlp-viewer"
] |
2,117
|
load_metric from local "glue.py" meet error 'NoneType' object is not callable
|
actual_task = "mnli" if task == "mnli-mm" else task
dataset = load_dataset(path='/home/glue.py', name=actual_task)
metric = load_metric(path='/home/glue.py', name=actual_task)
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-8-7ab77a465d81> in <module>
1 actual_task = "mnli" if task == "mnli-mm" else task
2 dataset = load_dataset(path='/home/jcli/glue.py', name=actual_task)
----> 3 metric = load_metric(path='/home/jcli/glue.py', name=actual_task)
~/anaconda3/envs/pytorch/lib/python3.6/site-packages/datasets/load.py in load_metric(path, config_name, process_id, num_process, cache_dir, experiment_id, keep_in_memory, download_config, download_mode, script_version, **metric_init_kwargs)
508 keep_in_memory=keep_in_memory,
509 experiment_id=experiment_id,
--> 510 **metric_init_kwargs,
511 )
512
TypeError: 'NoneType' object is not callable
Please help
|
CLOSED
| 2021-03-26T02:35:22
| 2021-08-25T21:44:05
| 2021-03-26T02:40:26
|
https://github.com/huggingface/datasets/issues/2117
|
Frankie123421
| 3
|
[] |
2,116
|
Creating custom dataset results in error while calling the map() function
|
calling `map()` of `datasets` library results into an error while defining a Custom dataset.
Reproducible example:
```
import datasets
class MyDataset(datasets.Dataset):
def __init__(self, sentences):
"Initialization"
self.samples = sentences
def __len__(self):
"Denotes the total number of samples"
return len(self.samples)
def __getitem__(self, index):
"Generates one sample of data"
# Select sample
# Load data and get label
samples = self.samples[index]
return samples
def preprocess_function_train(examples):
inputs = examples
labels = [example+tokenizer.eos_token for example in examples ]
inputs = tokenizer(inputs, max_length=30, padding=True, truncation=True)
labels = tokenizer(labels, max_length=30, padding=True, truncation=True)
model_inputs = inputs
model_inputs["labels"] = labels["input_ids"]
print("about to return")
return model_inputs
##train["sentence"] is dataframe column
train_dataset = MyDataset(train['sentence'].values.tolist())
train_dataset = train_dataset.map(
preprocess_function,
batched = True,
batch_size=32
)
```
Stack trace of error:
```
Traceback (most recent call last):
File "dir/train_generate.py", line 362, in <module>
main()
File "dir/train_generate.py", line 245, in main
train_dataset = train_dataset.map(
File "anaconda_dir/anaconda3/envs/env1/lib/python3.8/site-packages/datasets/arrow_dataset.py", line 1244, in map
return self._map_single(
File "anaconda_dir/anaconda3/envs/env1/lib/python3.8/site-packages/datasets/arrow_dataset.py", line 149, in wrapper
unformatted_columns = set(self.column_names) - set(self._format_columns or [])
File "anaconda_dir/anaconda3/envs/env1/lib/python3.8/site-packages/datasets/arrow_dataset.py", line 526, in column_names
return self._data.column_names
AttributeError: 'MyDataset' object has no attribute '_data'
```
|
CLOSED
| 2021-03-26T00:37:46
| 2021-03-31T14:30:32
| 2021-03-31T14:30:32
|
https://github.com/huggingface/datasets/issues/2116
|
GeetDsa
| 1
|
[] |
2,115
|
The datasets.map() implementation modifies the datatype of os.environ object
|
In our testing, we noticed that the datasets.map() implementation is modifying the datatype of python os.environ object from '_Environ' to 'dict'.
This causes following function calls to fail as follows:
`
x = os.environ.get("TEST_ENV_VARIABLE_AFTER_dataset_map", default=None)
TypeError: get() takes no keyword arguments
`
It looks like the following line in datasets.map implementation introduced this functionality.
https://github.com/huggingface/datasets/blob/0cb1ac06acb0df44a1cf4128d03a01865faa2504/src/datasets/arrow_dataset.py#L1421
Here is the test script to reproduce this error.
```
from datasets import load_dataset
from transformers import AutoTokenizer
import os
def test_train():
model_checkpoint = "distilgpt2"
datasets = load_dataset('wikitext', 'wikitext-2-raw-v1')
tokenizer = AutoTokenizer.from_pretrained(model_checkpoint, use_fast=True)
tokenizer.pad_token = tokenizer.eos_token
def tokenize_function(examples):
y = tokenizer(examples['text'], truncation=True, max_length=64)
return y
x = os.environ.get("TEST_ENV_VARIABLE_BEFORE_dataset_map", default=None)
print(f"Testing environment variable: TEST_ENV_VARIABLE_BEFORE_dataset_map {x}")
print(f"Data type of os.environ before datasets.map = {os.environ.__class__.__name__}")
datasets.map(tokenize_function, batched=True, num_proc=2, remove_columns=["text"])
print(f"Data type of os.environ after datasets.map = {os.environ.__class__.__name__}")
x = os.environ.get("TEST_ENV_VARIABLE_AFTER_dataset_map", default=None)
print(f"Testing environment variable: TEST_ENV_VARIABLE_AFTER_dataset_map {x}")
if __name__ == "__main__":
test_train()
```
|
CLOSED
| 2021-03-25T20:29:19
| 2021-03-26T15:13:52
| 2021-03-26T15:13:52
|
https://github.com/huggingface/datasets/issues/2115
|
leleamol
| 0
|
[] |
2,108
|
Is there a way to use a GPU only when training an Index in the process of add_faisis_index?
|
Motivation - Some FAISS indexes like IVF consist of the training step that clusters the dataset into a given number of indexes. It would be nice if we can use a GPU to do the training step and covert the index back to CPU as mention in [this faiss example](https://gist.github.com/mdouze/46d6bbbaabca0b9778fca37ed2bcccf6).
|
OPEN
| 2021-03-24T21:32:16
| 2021-03-25T06:31:43
| null |
https://github.com/huggingface/datasets/issues/2108
|
shamanez
| 0
|
[
"question"
] |
2,106
|
WMT19 Dataset for Kazakh-English is not formatted correctly
|
In addition to the bug of languages being switched from Issue @415, there are incorrect translations in the dataset because the English-Kazakh translations have a one off formatting error.
The News Commentary v14 parallel data set for kk-en from http://www.statmt.org/wmt19/translation-task.html has a bug here:
> Line 94. The Swiss National Bank, for its part, has been battling with the deflationary effects of the franc’s dramatic appreciation over the past few years. Швейцарияның Ұлттық банкі өз тарапынан, соңғы бірнеше жыл ішінде франк құнының қатты өсуінің дефляциялық әсерімен күресіп келеді.
>
> Line 95. Дефляциялық күштер 2008 жылы терең және ұзаққа созылған жаһандық дағдарысқа байланысты орын алған ірі экономикалық және қаржылық орын алмасулардың арқасында босатылды. Жеке қарыз қаражаты үлесінің қысқаруы орталық банктің рефляцияға жұмсалған күш-жігеріне тұрақты соққан қарсы желдей болды.
>
> Line 96. The deflationary forces were unleashed by the major economic and financial dislocations associated with the deep and protracted global crisis that erupted in 2008. Private deleveraging became a steady headwind to central bank efforts to reflate. 2009 жылы, алдыңғы қатарлы экономикалардың шамамен үштен бірі бағаның төмендеуін көрсетті, бұл соғыстан кейінгі жоғары деңгей болды.
As you can see, line 95 has only the Kazakh translation which should be part of line 96. This causes all of the following English-Kazakh translation pairs to be one off rendering ALL of those translations incorrect. This issue was not fixed when the dataset was imported to Huggingface. By running this code
```
import datasets
from datasets import load_dataset
dataset = load_dataset('wmt19', 'kk-en')
for key in dataset['train']['translation']:
if 'The deflationary forces were unleashed by the major economic and financial dislocations associated with the deep and protracted global crisis that erupted in 2008.' in key['kk']:
print(key['en'])
print(key['kk'])
break
```
we get:
> 2009 жылы, алдыңғы қатарлы экономикалардың шамамен үштен бірі бағаның төмендеуін көрсетті, бұл соғыстан кейінгі жоғары деңгей болды.
> The deflationary forces were unleashed by the major economic and financial dislocations associated with the deep and protracted global crisis that erupted in 2008. Private deleveraging became a steady headwind to central bank efforts to reflate.
which shows that the issue still persists in the Huggingface dataset. The Kazakh sentence matches up to the next English sentence in the dataset instead of the current one.
Please let me know if there's you have any ideas to fix this one-off error from the dataset or if this can be fixed by Huggingface.
|
OPEN
| 2021-03-23T20:14:47
| 2021-03-25T21:36:20
| null |
https://github.com/huggingface/datasets/issues/2106
|
trina731
| 1
|
[
"dataset bug"
] |
2,105
|
Request to remove S2ORC dataset
|
Hi! I was wondering if it's possible to remove [S2ORC](https://huggingface.co/datasets/s2orc) from hosting on Huggingface's platform? Unfortunately, there are some legal considerations about how we make this data available. Happy to add back to Huggingface's platform once we work out those hurdles! Thanks!
|
OPEN
| 2021-03-23T19:43:06
| 2021-08-04T19:18:02
| null |
https://github.com/huggingface/datasets/issues/2105
|
kyleclo
| 3
|
[] |
2,104
|
Trouble loading wiki_movies
|
Hello,
I am trying to load_dataset("wiki_movies") and it gives me this error -
`FileNotFoundError: Couldn't find file locally at wiki_movies/wiki_movies.py, or remotely at https://raw.githubusercontent.com/huggingface/datasets/1.1.2/datasets/wiki_movies/wiki_movies.py or https://s3.amazonaws.com/datasets.huggingface.co/datasets/datasets/wiki_movies/wiki_movies.py`
Trying to do `python run_mlm.py \
--model_name_or_path roberta-base \
--dataset_name wiki_movies \` also gives the same error.
Is this something on my end? From what I can tell, this dataset was re-added by @lhoestq a few months ago.
Thank you!
|
CLOSED
| 2021-03-23T18:59:54
| 2022-03-30T08:22:58
| 2022-03-30T08:22:58
|
https://github.com/huggingface/datasets/issues/2104
|
adityaarunsinghal
| 2
|
[] |
2,103
|
citation, homepage, and license fields of `dataset_info.json` are duplicated many times
|
This happens after a `map` operation when `num_proc` is set to `>1`. I tested this by cleaning up the json before running the `map` op on the dataset so it's unlikely it's coming from an earlier concatenation.
Example result:
```
"citation": "@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n url = {https://dumps.wikimedia.org}\n}\n\n@ONLINE {wikidump,\n author = {Wikimedia Foundation},\n title = {Wikimedia Downloads},\n
```
@lhoestq and I believe this is happening due to the fields being concatenated `num_proc` times.
|
CLOSED
| 2021-03-23T17:18:09
| 2021-04-06T14:39:59
| 2021-04-06T14:39:59
|
https://github.com/huggingface/datasets/issues/2103
|
samsontmr
| 1
|
[
"enhancement",
"good first issue"
] |
2,099
|
load_from_disk takes a long time to load local dataset
|
I have an extremely large tokenized dataset (24M examples) that loads in a few minutes. However, after adding a column similar to `input_ids` (basically a list of integers) and saving the dataset to disk, the load time goes to >1 hour. I've even tried using `np.uint8` after seeing #1985 but it doesn't seem to be helping (the total size seems to be smaller though).
Does anyone know what could be the issue? Or does the casting of that column to `int8` need to happen in the function that writes the arrow table instead of in the `map` where I create the list of integers?
Tagging @lhoestq since you seem to be working on these issues and PRs :)
|
CLOSED
| 2021-03-23T09:28:37
| 2021-03-23T17:12:16
| 2021-03-23T17:12:16
|
https://github.com/huggingface/datasets/issues/2099
|
samsontmr
| 8
|
[] |
2,098
|
SQuAD version
|
Hi~
I want train on squad dataset. What's the version of the squad? Is it 1.1 or 1.0? I'm new in QA, I don't find some descriptions about it.
|
CLOSED
| 2021-03-23T07:47:54
| 2021-03-26T09:48:54
| 2021-03-26T09:48:54
|
https://github.com/huggingface/datasets/issues/2098
|
h-peng17
| 2
|
[] |
2,096
|
CoNLL 2003 dataset not including German
|
Hello, thanks for all the work on developing and maintaining this amazing platform, which I am enjoying working with!
I was wondering if there is a reason why the German CoNLL 2003 dataset is not included in the [repository](https://github.com/huggingface/datasets/tree/master/datasets/conll2003), since a copy of it could be found in some places on the internet such as GitHub? I could help adding the German data to the hub, unless there are some copyright issues that I am unaware of...
This is considering that many work use the union of CoNLL 2002 and 2003 datasets for comparing cross-lingual NER transfer performance in `en`, `de`, `es`, and `nl`. E.g., [XLM-R](https://www.aclweb.org/anthology/2020.acl-main.747.pdf).
## Adding a Dataset
- **Name:** CoNLL 2003 German
- **Paper:** https://www.aclweb.org/anthology/W03-0419/
- **Data:** https://github.com/huggingface/datasets/tree/master/datasets/conll2003
|
CLOSED
| 2021-03-22T19:23:56
| 2023-07-25T16:49:07
| 2023-07-25T16:49:07
|
https://github.com/huggingface/datasets/issues/2096
|
rxian
| 2
|
[
"dataset request"
] |
2,092
|
How to disable making arrow tables in load_dataset ?
|
Is there a way to disable the construction of arrow tables, or to make them on the fly as the dataset is being used ?
|
CLOSED
| 2021-03-21T04:50:07
| 2022-06-01T16:49:52
| 2022-06-01T16:49:52
|
https://github.com/huggingface/datasets/issues/2092
|
Jeevesh8
| 7
|
[] |
2,089
|
Add documentaton for dataset README.md files
|
Hi,
the dataset README files have special headers.
Somehow a documenation of the allowed values and tags is missing.
Could you add that?
Just to give some concrete questions that should be answered imo:
- which values can be passted to multilinguality?
- what should be passed to language_creators?
- which values should licenses have? What do I say when it is a custom license? Should I add a link?
- how should I choose size_categories ? What are valid ranges?
- what are valid task_categories?
Thanks
Philip
|
CLOSED
| 2021-03-20T11:44:38
| 2023-07-25T16:45:38
| 2023-07-25T16:45:37
|
https://github.com/huggingface/datasets/issues/2089
|
PhilipMay
| 8
|
[] |
2,084
|
CUAD - Contract Understanding Atticus Dataset
|
## Adding a Dataset
- **Name:** CUAD - Contract Understanding Atticus Dataset
- **Description:** As one of the only large, specialized NLP benchmarks annotated by experts, CUAD can serve as a challenging research benchmark for the broader NLP community.
- **Paper:** https://arxiv.org/abs/2103.06268
- **Data:** https://github.com/TheAtticusProject/cuad/
- **Motivation:** good domain specific datasets are valuable
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
|
CLOSED
| 2021-03-19T09:27:43
| 2021-04-16T08:50:44
| 2021-04-16T08:50:44
|
https://github.com/huggingface/datasets/issues/2084
|
theo-m
| 1
|
[
"dataset request"
] |
2,083
|
`concatenate_datasets` throws error when changing the order of datasets to concatenate
|
Hey,
I played around with the `concatenate_datasets(...)` function: https://huggingface.co/docs/datasets/package_reference/main_classes.html?highlight=concatenate_datasets#datasets.concatenate_datasets
and noticed that when the order in which the datasets are concatenated changes an error is thrown where it should not IMO.
Here is a google colab to reproduce the error: https://colab.research.google.com/drive/17VTFU4KQ735-waWZJjeOHS6yDTfV5ekK?usp=sharing
|
CLOSED
| 2021-03-19T08:29:48
| 2021-04-09T09:25:33
| 2021-04-09T09:25:33
|
https://github.com/huggingface/datasets/issues/2083
|
patrickvonplaten
| 1
|
[] |
2,080
|
Multidimensional arrays in a Dataset
|
Hi,
I'm trying to put together a `datasets.Dataset` to be used with LayoutLM which is available in `transformers`. This model requires as input the bounding boxes of each of the token of a sequence. This is when I realized that `Dataset` does not support multi-dimensional arrays as a value for a column in a row.
The following code results in conversion error in pyarrow (`pyarrow.lib.ArrowInvalid: ('Can only convert 1-dimensional array values', 'Conversion failed for column bbox with type object')`)
```
from datasets import Dataset
import pandas as pd
import numpy as np
dataset = pd.DataFrame({
'bbox': [
np.array([[1,2,3,4],[1,2,3,4],[1,2,3,4]]),
np.array([[1,2,3,4],[1,2,3,4],[1,2,3,4]]),
np.array([[1,2,3,4],[1,2,3,4],[1,2,3,4]]),
np.array([[1,2,3,4],[1,2,3,4],[1,2,3,4]])
],
'input_ids': [1, 2, 3, 4]
})
dataset = Dataset.from_pandas(dataset)
```
Since I wanted to use pytorch for the downstream training task, I also tried a few ways to directly put in a column of 2-D pytorch tensor in a formatted dataset, but I can only have a list of 1-D tensors, or a list of arrays, or a list of lists.
```
import torch
from datasets import Dataset
import pandas as pd
dataset = pd.DataFrame({
'bbox': [
[[1,2,3,4],[1,2,3,4],[1,2,3,4]],
[[1,2,3,4],[1,2,3,4],[1,2,3,4]],
[[1,2,3,4],[1,2,3,4],[1,2,3,4]],
[[1,2,3,4],[1,2,3,4],[1,2,3,4]]
],
'input_ids': [1, 2, 3, 4]
})
dataset = Dataset.from_pandas(dataset)
def test(examples):
return {'bbbox': torch.Tensor(examples['bbox'])}
dataset = dataset.map(test)
print(dataset[0]['bbox'])
print(dataset[0]['bbbox'])
dataset.set_format(type='torch', columns=['input_ids', 'bbox'], output_all_columns=True)
print(dataset[0]['bbox'])
print(dataset[0]['bbbox'])
def test2(examples):
return {'bbbox': torch.stack(examples['bbox'])}
dataset = dataset.map(test2)
print(dataset[0]['bbox'])
print(dataset[0]['bbbox'])
```
Is is possible to support n-D arrays/tensors in datasets?
It seems that it can also be useful for this [feature request](https://github.com/huggingface/datasets/issues/263).
|
CLOSED
| 2021-03-18T16:29:14
| 2021-03-25T12:46:53
| 2021-03-25T12:46:53
|
https://github.com/huggingface/datasets/issues/2080
|
vermouthmjl
| 2
|
[] |
2,078
|
MemoryError when computing WER metric
|
Hi, I'm trying to follow the ASR example to try Wav2Vec. This is the code that I use for WER calculation:
```
wer = load_metric("wer")
print(wer.compute(predictions=result["predicted"], references=result["target"]))
```
However, I receive the following exception:
`Traceback (most recent call last):
File "/home/diego/IpGlobal/wav2vec/test_wav2vec.py", line 51, in <module>
print(wer.compute(predictions=result["predicted"], references=result["target"]))
File "/home/diego/miniconda3/envs/wav2vec3.6/lib/python3.6/site-packages/datasets/metric.py", line 403, in compute
output = self._compute(predictions=predictions, references=references, **kwargs)
File "/home/diego/.cache/huggingface/modules/datasets_modules/metrics/wer/73b2d32b723b7fb8f204d785c00980ae4d937f12a65466f8fdf78706e2951281/wer.py", line 94, in _compute
return wer(references, predictions)
File "/home/diego/miniconda3/envs/wav2vec3.6/lib/python3.6/site-packages/jiwer/measures.py", line 81, in wer
truth, hypothesis, truth_transform, hypothesis_transform, **kwargs
File "/home/diego/miniconda3/envs/wav2vec3.6/lib/python3.6/site-packages/jiwer/measures.py", line 192, in compute_measures
H, S, D, I = _get_operation_counts(truth, hypothesis)
File "/home/diego/miniconda3/envs/wav2vec3.6/lib/python3.6/site-packages/jiwer/measures.py", line 273, in _get_operation_counts
editops = Levenshtein.editops(source_string, destination_string)
MemoryError`
My system has more than 10GB of available RAM. Looking at the code, I think that it could be related to the way jiwer does the calculation, as it is pasting all the sentences in a single string before calling Levenshtein editops function.
|
CLOSED
| 2021-03-18T11:30:05
| 2021-05-01T08:31:49
| 2021-04-06T07:20:43
|
https://github.com/huggingface/datasets/issues/2078
|
diego-fustes
| 11
|
[
"metric bug"
] |
2,076
|
Issue: Dataset download error
|
The download link in `iwslt2017.py` file does not seem to work anymore.
For example, `FileNotFoundError: Couldn't find file at https://wit3.fbk.eu/archive/2017-01-trnted/texts/zh/en/zh-en.tgz`
Would be nice if we could modify it script and use the new downloadable link?
|
OPEN
| 2021-03-18T06:36:06
| 2021-03-22T11:52:31
| null |
https://github.com/huggingface/datasets/issues/2076
|
XuhuiZhou
| 7
|
[
"dataset bug"
] |
2,075
|
ConnectionError: Couldn't reach common_voice.py
|
When I run:
from datasets import load_dataset, load_metric
common_voice_train = load_dataset("common_voice", "zh-CN", split="train+validation")
common_voice_test = load_dataset("common_voice", "zh-CN", split="test")
Got:
ConnectionError: Couldn't reach https://raw.githubusercontent.com/huggingface/datasets/master/datasets/common_voice/common_voice.py
Version:
1.4.1
Thanks! @lhoestq @LysandreJik @thomwolf
|
CLOSED
| 2021-03-18T01:19:06
| 2021-03-20T10:29:41
| 2021-03-20T10:29:41
|
https://github.com/huggingface/datasets/issues/2075
|
LifaSun
| 2
|
[] |
2,071
|
Multiprocessing is slower than single process
|
```python
# benchmark_filter.py
import logging
import sys
import time
from datasets import load_dataset, set_caching_enabled
if __name__ == "__main__":
set_caching_enabled(False)
logging.basicConfig(level=logging.DEBUG)
bc = load_dataset("bookcorpus")
now = time.time()
try:
bc["train"].filter(lambda x: len(x["text"]) < 64, num_proc=int(sys.argv[1]))
except Exception as e:
print(f"cancelled: {e}")
elapsed = time.time() - now
print(elapsed)
```
Running `python benchmark_filter.py 1` (20min+) is faster than `python benchmark_filter.py 2` (2hrs+)
|
CLOSED
| 2021-03-17T16:08:58
| 2021-03-18T09:10:23
| 2021-03-18T09:10:23
|
https://github.com/huggingface/datasets/issues/2071
|
theo-m
| 1
|
[
"bug"
] |
2,070
|
ArrowInvalid issue for squad v2 dataset
|
Hello, I am using the huggingface official question answering example notebook (https://colab.research.google.com/github/huggingface/notebooks/blob/master/examples/question_answering.ipynb).
In the prepare_validation_features function, I made some modifications to tokenize a new set of quesions with the original contexts and save them in three different list called candidate_input_dis, candidate_attetion_mask and candidate_token_type_ids. When I try to run the next cell for dataset.map, I got the following error:
`ArrowInvalid: Column 1 named candidate_attention_mask expected length 1180 but got length 1178`
My code is as follows:
```
def generate_candidate_questions(examples):
val_questions = examples["question"]
candididate_questions = random.sample(datasets["train"]["question"], len(val_questions))
candididate_questions = [x[:max_length] for x in candididate_questions]
return candididate_questions
def prepare_validation_features(examples, use_mixing=False):
pad_on_right = tokenizer.padding_side == "right"
tokenized_examples = tokenizer(
examples["question" if pad_on_right else "context"],
examples["context" if pad_on_right else "question"],
truncation="only_second" if pad_on_right else "only_first",
max_length=max_length,
stride=doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
padding="max_length",
)
if use_mixing:
candidate_questions = generate_candidate_questions(examples)
tokenized_candidates = tokenizer(
candidate_questions if pad_on_right else examples["context"],
examples["context"] if pad_on_right else candidate_questions,
truncation="only_second" if pad_on_right else "only_first",
max_length=max_length,
stride=doc_stride,
return_overflowing_tokens=True,
return_offsets_mapping=True,
padding="max_length",
)
sample_mapping = tokenized_examples.pop("overflow_to_sample_mapping")
tokenized_examples["example_id"] = []
if use_mixing:
tokenized_examples["candidate_input_ids"] = tokenized_candidates["input_ids"]
tokenized_examples["candidate_attention_mask"] = tokenized_candidates["attention_mask"]
tokenized_examples["candidate_token_type_ids"] = tokenized_candidates["token_type_ids"]
for i in range(len(tokenized_examples["input_ids"])):
sequence_ids = tokenized_examples.sequence_ids(i)
context_index = 1 if pad_on_right else 0
sample_index = sample_mapping[i]
tokenized_examples["example_id"].append(examples["id"][sample_index])
tokenized_examples["offset_mapping"][i] = [
(o if sequence_ids[k] == context_index else None)
for k, o in enumerate(tokenized_examples["offset_mapping"][i])
]
return tokenized_examples
validation_features = datasets["validation"].map(
lambda xs: prepare_validation_features(xs, True),
batched=True,
remove_columns=datasets["validation"].column_names
)
```
I guess this might happen because of the batched=True. I see similar issues in this repo related to arrow table length mismatch error, but in their cases, the numbers vary a lot. In my case, this error always happens when the expected length and unexpected length are very close. Thanks for the help!
|
CLOSED
| 2021-03-17T13:51:49
| 2021-08-04T17:57:16
| 2021-08-04T17:57:16
|
https://github.com/huggingface/datasets/issues/2070
|
MichaelYxWang
| 1
|
[] |
2,068
|
PyTorch not available error on SageMaker GPU docker though it is installed
|
I get en error when running data loading using SageMaker SDK
```
File "main.py", line 34, in <module>
run_training()
File "main.py", line 25, in run_training
dm.setup('fit')
File "/opt/conda/lib/python3.6/site-packages/pytorch_lightning/core/datamodule.py", line 92, in wrapped_fn
return fn(*args, **kwargs)
File "/opt/ml/code/data_module.py", line 103, in setup
self.dataset[split].set_format(type="torch", columns=self.columns)
File "/opt/conda/lib/python3.6/site-packages/datasets/fingerprint.py", line 337, in wrapper
out = func(self, *args, **kwargs)
File "/opt/conda/lib/python3.6/site-packages/datasets/arrow_dataset.py", line 995, in set_format
_ = get_formatter(type, **format_kwargs)
File "/opt/conda/lib/python3.6/site-packages/datasets/formatting/__init__.py", line 114, in get_formatter
raise _FORMAT_TYPES_ALIASES_UNAVAILABLE[format_type]
ValueError: PyTorch needs to be installed to be able to return PyTorch tensors.
```
when trying to execute dataset loading using this notebook https://github.com/PyTorchLightning/pytorch-lightning/blob/master/notebooks/04-transformers-text-classification.ipynb, specifically lines
```
self.columns = [c for c in self.dataset[split].column_names if c in self.loader_columns]
self.dataset[split].set_format(type="torch", columns=self.columns)
```
The SageMaker docker image used is 763104351884.dkr.ecr.eu-central-1.amazonaws.com/pytorch-training:1.4.0-gpu-py3 .
By running container interactively I have checked that torch loading completes successfully by executing `https://github.com/huggingface/datasets/blob/master/src/datasets/config.py#L39`.
Also as a first line in the data loading module I have
```
import os
os.environ["USE_TF"] = "0"
os.environ["USE_TORCH"] = "1"
````
But unfortunately the error stills persists. Any suggestions would be appreciated as I am stack.
Many Thanks!
|
CLOSED
| 2021-03-17T10:04:27
| 2021-06-14T04:47:30
| 2021-06-14T04:47:30
|
https://github.com/huggingface/datasets/issues/2068
|
sivakhno
| 7
|
[] |
2,067
|
Multiprocessing windows error
|
As described here https://huggingface.co/blog/fine-tune-xlsr-wav2vec2
When using the num_proc argument on windows the whole Python environment crashes and hanging in loop.
For example at the map_to_array part.
An error occures because the cache file already exists and windows throws and error. After this the log crashes into an loop
|
CLOSED
| 2021-03-17T09:12:28
| 2021-08-04T17:59:08
| 2021-08-04T17:59:08
|
https://github.com/huggingface/datasets/issues/2067
|
flozi00
| 10
|
[] |
2,065
|
Only user permission of saved cache files, not group
|
Hello,
It seems when a cached file is saved from calling `dataset.map` for preprocessing, it gets the user permissions and none of the user's group permissions. As we share data files across members of our team, this is causing a bit of an issue as we have to continually reset the permission of the files. Do you know any ways around this or a way to correctly set the permissions?
|
CLOSED
| 2021-03-17T00:20:22
| 2023-03-31T12:17:06
| 2021-05-10T06:45:29
|
https://github.com/huggingface/datasets/issues/2065
|
lorr1
| 26
|
[
"enhancement",
"good first issue"
] |
2,061
|
Cannot load udpos subsets from xtreme dataset using load_dataset()
|
Hello,
I am trying to load the udpos English subset from xtreme dataset, but this faces an error during loading. I am using datasets v1.4.1, pip install. I have tried with other udpos languages which also fail, though loading a different subset altogether (such as XNLI) has no issue. I have also tried on Colab and faced the same error.
Reprex is:
`from datasets import load_dataset `
`dataset = load_dataset('xtreme', 'udpos.English')`
The error is:
`KeyError: '_'`
The full traceback is:
KeyError Traceback (most recent call last)
<ipython-input-5-7181359ea09d> in <module>
1 from datasets import load_dataset
----> 2 dataset = load_dataset('xtreme', 'udpos.English')
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\load.py in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, script_version, use_auth_token, **config_kwargs)
738
739 # Download and prepare data
--> 740 builder_instance.download_and_prepare(
741 download_config=download_config,
742 download_mode=download_mode,
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\builder.py in download_and_prepare(self, download_config, download_mode, ignore_verifications, try_from_hf_gcs, dl_manager, base_path, use_auth_token, **download_and_prepare_kwargs)
576 logger.warning("HF google storage unreachable. Downloading and preparing it from source")
577 if not downloaded_from_gcs:
--> 578 self._download_and_prepare(
579 dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
580 )
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\builder.py in _download_and_prepare(self, dl_manager, verify_infos, **prepare_split_kwargs)
654 try:
655 # Prepare split will record examples associated to the split
--> 656 self._prepare_split(split_generator, **prepare_split_kwargs)
657 except OSError as e:
658 raise OSError(
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\builder.py in _prepare_split(self, split_generator)
977 generator, unit=" examples", total=split_info.num_examples, leave=False, disable=not_verbose
978 ):
--> 979 example = self.info.features.encode_example(record)
980 writer.write(example)
981 finally:
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\features.py in encode_example(self, example)
946 def encode_example(self, example):
947 example = cast_to_python_objects(example)
--> 948 return encode_nested_example(self, example)
949
950 def encode_batch(self, batch):
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\features.py in encode_nested_example(schema, obj)
840 # Nested structures: we allow dict, list/tuples, sequences
841 if isinstance(schema, dict):
--> 842 return {
843 k: encode_nested_example(sub_schema, sub_obj) for k, (sub_schema, sub_obj) in utils.zip_dict(schema, obj)
844 }
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\features.py in <dictcomp>(.0)
841 if isinstance(schema, dict):
842 return {
--> 843 k: encode_nested_example(sub_schema, sub_obj) for k, (sub_schema, sub_obj) in utils.zip_dict(schema, obj)
844 }
845 elif isinstance(schema, (list, tuple)):
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\features.py in encode_nested_example(schema, obj)
868 # ClassLabel will convert from string to int, TranslationVariableLanguages does some checks
869 elif isinstance(schema, (ClassLabel, TranslationVariableLanguages, Value, _ArrayXD)):
--> 870 return schema.encode_example(obj)
871 # Other object should be directly convertible to a native Arrow type (like Translation and Translation)
872 return obj
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\features.py in encode_example(self, example_data)
647 # If a string is given, convert to associated integer
648 if isinstance(example_data, str):
--> 649 example_data = self.str2int(example_data)
650
651 # Allowing -1 to mean no label.
~\Anaconda3\envs\mlenv\lib\site-packages\datasets\features.py in str2int(self, values)
605 if value not in self._str2int:
606 value = value.strip()
--> 607 output.append(self._str2int[str(value)])
608 else:
609 # No names provided, try to integerize
KeyError: '_'
|
CLOSED
| 2021-03-16T09:32:13
| 2021-06-18T11:54:11
| 2021-06-18T11:54:10
|
https://github.com/huggingface/datasets/issues/2061
|
adzcodez
| 6
|
[
"good first issue"
] |
2,059
|
Error while following docs to load the `ted_talks_iwslt` dataset
|
I am currently trying to load the `ted_talks_iwslt` dataset into google colab.
The [docs](https://huggingface.co/datasets/ted_talks_iwslt) mention the following way of doing so.
```python
dataset = load_dataset("ted_talks_iwslt", language_pair=("it", "pl"), year="2014")
```
Executing it results in the error attached below.
```
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-6-7dcc67154ef9> in <module>()
----> 1 dataset = load_dataset("ted_talks_iwslt", language_pair=("it", "pl"), year="2014")
4 frames
/usr/local/lib/python3.7/dist-packages/datasets/load.py in load_dataset(path, name, data_dir, data_files, split, cache_dir, features, download_config, download_mode, ignore_verifications, keep_in_memory, save_infos, script_version, use_auth_token, **config_kwargs)
730 hash=hash,
731 features=features,
--> 732 **config_kwargs,
733 )
734
/usr/local/lib/python3.7/dist-packages/datasets/builder.py in __init__(self, writer_batch_size, *args, **kwargs)
927
928 def __init__(self, *args, writer_batch_size=None, **kwargs):
--> 929 super(GeneratorBasedBuilder, self).__init__(*args, **kwargs)
930 # Batch size used by the ArrowWriter
931 # It defines the number of samples that are kept in memory before writing them
/usr/local/lib/python3.7/dist-packages/datasets/builder.py in __init__(self, cache_dir, name, hash, features, **config_kwargs)
241 name,
242 custom_features=features,
--> 243 **config_kwargs,
244 )
245
/usr/local/lib/python3.7/dist-packages/datasets/builder.py in _create_builder_config(self, name, custom_features, **config_kwargs)
337 if "version" not in config_kwargs and hasattr(self, "VERSION") and self.VERSION:
338 config_kwargs["version"] = self.VERSION
--> 339 builder_config = self.BUILDER_CONFIG_CLASS(**config_kwargs)
340
341 # otherwise use the config_kwargs to overwrite the attributes
/root/.cache/huggingface/modules/datasets_modules/datasets/ted_talks_iwslt/024d06b1376b361e59245c5878ab8acf9a7576d765f2d0077f61751158e60914/ted_talks_iwslt.py in __init__(self, language_pair, year, **kwargs)
219 description=description,
220 version=datasets.Version("1.1.0", ""),
--> 221 **kwargs,
222 )
223
TypeError: __init__() got multiple values for keyword argument 'version'
```
How to resolve this?
PS: Thanks a lot @huggingface team for creating this great library!
|
CLOSED
| 2021-03-16T09:12:19
| 2021-03-16T18:00:31
| 2021-03-16T18:00:07
|
https://github.com/huggingface/datasets/issues/2059
|
ekdnam
| 2
|
[
"dataset bug"
] |
2,058
|
Is it possible to convert a `tfds` to HuggingFace `dataset`?
|
I was having some weird bugs with `C4`dataset version of HuggingFace, so I decided to try to download `C4`from `tfds`. I would like to know if it is possible to convert a tfds dataset to HuggingFace dataset format :)
I can also open a new issue reporting the bug I'm receiving with `datasets.load_dataset('c4','en')` in the future if you think that it would be useful.
Thanks!
|
CLOSED
| 2021-03-15T20:18:47
| 2023-07-25T16:47:40
| 2023-07-25T16:47:40
|
https://github.com/huggingface/datasets/issues/2058
|
abarbosa94
| 1
|
[] |
2,056
|
issue with opus100/en-fr dataset
|
Hi
I am running run_mlm.py code of huggingface repo with opus100/fr-en pair, I am getting this error, note that this error occurs for only this pairs and not the other pairs. Any idea why this is occurring? and how I can solve this?
Thanks a lot @lhoestq for your help in advance.
`
thread '<unnamed>' panicked at 'index out of bounds: the len is 617 but the index is 617', /__w/tokenizers/tokenizers/tokenizers/src/tokenizer/normalizer.rs:382:21
note: run with `RUST_BACKTRACE=1` environment variable to display a backtrace
63%|██████████████████████████████████████████████████████████▊ | 626/1000 [00:27<00:16, 22.69ba/s]
Traceback (most recent call last):
File "run_mlm.py", line 550, in <module>
main()
File "run_mlm.py", line 412, in main
in zip(data_args.dataset_name, data_args.dataset_config_name)]
File "run_mlm.py", line 411, in <listcomp>
logger) for dataset_name, dataset_config_name\
File "/user/dara/dev/codes/seq2seq/data/tokenize_datasets.py", line 96, in get_tokenized_dataset
load_from_cache_file=not data_args.overwrite_cache,
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/dataset_dict.py", line 448, in map
for k, dataset in self.items()
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/dataset_dict.py", line 448, in <dictcomp>
for k, dataset in self.items()
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1309, in map
update_data=update_data,
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 204, in wrapper
out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/fingerprint.py", line 337, in wrapper
out = func(self, *args, **kwargs)
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1574, in _map_single
batch, indices, check_same_num_examples=len(self.list_indexes()) > 0, offset=offset
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/arrow_dataset.py", line 1490, in apply_function_on_filtered_inputs
function(*fn_args, effective_indices, **fn_kwargs) if with_indices else function(*fn_args, **fn_kwargs)
File "/user/dara/dev/codes/seq2seq/data/tokenize_datasets.py", line 89, in tokenize_function
return tokenizer(examples[text_column_name], return_special_tokens_mask=True)
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/transformers/tokenization_utils_base.py", line 2347, in __call__
**kwargs,
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/transformers/tokenization_utils_base.py", line 2532, in batch_encode_plus
**kwargs,
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/transformers/tokenization_utils_fast.py", line 384, in _batch_encode_plus
is_pretokenized=is_split_into_words,
pyo3_runtime.PanicException: index out of bounds: the len is 617 but the index is 617
`
|
CLOSED
| 2021-03-15T11:32:42
| 2021-03-16T15:49:00
| 2021-03-16T15:48:59
|
https://github.com/huggingface/datasets/issues/2056
|
dorost1234
| 3
|
[] |
2,055
|
is there a way to override a dataset object saved with save_to_disk?
|
At the moment when I use save_to_disk, it uses the arbitrary name for the arrow file. Is there a way to override such an object?
|
CLOSED
| 2021-03-15T10:50:53
| 2021-03-22T04:06:17
| 2021-03-22T04:06:17
|
https://github.com/huggingface/datasets/issues/2055
|
shamanez
| 4
|
[] |
2,054
|
Could not find file for ZEST dataset
|
I am trying to use zest dataset from Allen AI using below code in colab,
```
!pip install -q datasets
from datasets import load_dataset
dataset = load_dataset("zest")
```
I am getting the following error,
```
Using custom data configuration default
Downloading and preparing dataset zest/default (download: 5.53 MiB, generated: 19.96 MiB, post-processed: Unknown size, total: 25.48 MiB) to /root/.cache/huggingface/datasets/zest/default/0.0.0/1f7a230fbfc964d979bbca0f0130fbab3259fce547ee758ad8aa4f9c9bec6cca...
---------------------------------------------------------------------------
FileNotFoundError Traceback (most recent call last)
<ipython-input-6-18dbbc1a4b8a> in <module>()
1 from datasets import load_dataset
2
----> 3 dataset = load_dataset("zest")
9 frames
/usr/local/lib/python3.7/dist-packages/datasets/utils/file_utils.py in get_from_cache(url, cache_dir, force_download, proxies, etag_timeout, resume_download, user_agent, local_files_only, use_etag, max_retries, use_auth_token)
612 )
613 elif response is not None and response.status_code == 404:
--> 614 raise FileNotFoundError("Couldn't find file at {}".format(url))
615 _raise_if_offline_mode_is_enabled(f"Tried to reach {url}")
616 raise ConnectionError("Couldn't reach {}".format(url))
FileNotFoundError: Couldn't find file at https://ai2-datasets.s3-us-west-2.amazonaws.com/zest/zest.zip
```
|
CLOSED
| 2021-03-15T09:11:58
| 2021-05-03T09:30:24
| 2021-05-03T09:30:24
|
https://github.com/huggingface/datasets/issues/2054
|
bhadreshpsavani
| 4
|
[
"dataset bug"
] |
2,052
|
Timit_asr dataset repeats examples
|
Summary
When loading timit_asr dataset on datasets 1.4+, every row in the dataset is the same
Steps to reproduce
As an example, on this code there is the text from the training part:
Code snippet:
```
from datasets import load_dataset, load_metric
timit = load_dataset("timit_asr")
timit['train']['text']
#['Would such an act of refusal be useful?',
# 'Would such an act of refusal be useful?',
# 'Would such an act of refusal be useful?',
# 'Would such an act of refusal be useful?',
# 'Would such an act of refusal be useful?',
# 'Would such an act of refusal be useful?',
```
The same behavior happens for other columns
Expected behavior:
Different info on the actual timit_asr dataset
Actual behavior:
When loading timit_asr dataset on datasets 1.4+, every row in the dataset is the same. I've checked datasets 1.3 and the rows are different
Debug info
Streamlit version: (get it with $ streamlit version)
Python version: Python 3.6.12
Using Conda? PipEnv? PyEnv? Pex? Using pip
OS version: Centos-release-7-9.2009.1.el7.centos.x86_64
Additional information
You can check the same behavior on https://huggingface.co/datasets/viewer/?dataset=timit_asr
|
CLOSED
| 2021-03-14T11:43:43
| 2021-03-15T10:37:16
| 2021-03-15T10:37:16
|
https://github.com/huggingface/datasets/issues/2052
|
fermaat
| 2
|
[] |
2,050
|
Build custom dataset to fine-tune Wav2Vec2
|
Thank you for your recent tutorial on how to finetune Wav2Vec2 on a custom dataset. The example you gave here (https://huggingface.co/blog/fine-tune-xlsr-wav2vec2) was on the CommonVoice dataset. However, what if I want to load my own dataset? I have a manifest (transcript and their audio files) in a JSON file.
|
CLOSED
| 2021-03-13T22:01:10
| 2021-03-15T09:27:28
| 2021-03-15T09:27:28
|
https://github.com/huggingface/datasets/issues/2050
|
Omarnabk
| 3
|
[
"dataset request"
] |
2,048
|
github is not always available - probably need a back up
|
Yesterday morning github wasn't working:
```
:/tmp$ wget https://raw.githubusercontent.com/huggingface/datasets/1.4.1/metrics/sacrebleu/sacrebleu.py--2021-03-12 18:35:59-- https://raw.githubusercontent.com/huggingface/datasets/1.4.1/metrics/sacrebleu/sacrebleu.py
Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.108.133, 185.199.111.133, 185.199.109.133, ...
Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.108.133|:443... connected.
HTTP request sent, awaiting response... 500 Internal Server Error
2021-03-12 18:36:11 ERROR 500: Internal Server Error.
```
Suggestion: have a failover system and replicate the data on another system and reach there if gh isn't reachable? perhaps gh can be a master and the replicate a slave - so there is only one true source.
|
CLOSED
| 2021-03-13T18:03:32
| 2022-04-01T15:27:10
| 2022-04-01T15:27:10
|
https://github.com/huggingface/datasets/issues/2048
|
stas00
| 0
|
[] |
2,046
|
add_faisis_index gets very slow when doing it interatively
|
As the below code suggests, I want to run add_faisis_index in every nth interaction from the training loop. I have 7.2 million documents. Usually, it takes 2.5 hours (if I run an as a separate process similar to the script given in rag/use_own_knowleldge_dataset.py). Now, this takes usually 5hrs. Is this normal? Any way to make this process faster?
@lhoestq
```
def training_step(self, batch, batch_idx) -> Dict:
if (not batch_idx==0) and (batch_idx%5==0):
print("******************************************************")
ctx_encoder=self.trainer.model.module.module.model.rag.ctx_encoder
model_copy =type(ctx_encoder)(self.config_dpr) # get a new instance #this will be load in the CPU
model_copy.load_state_dict(ctx_encoder.state_dict()) # copy weights and stuff
list_of_gpus = ['cuda:2','cuda:3']
c_dir='/custom/cache/dir'
kb_dataset = load_dataset("csv", data_files=[self.custom_config.csv_path], split="train", delimiter="\t", column_names=["title", "text"],cache_dir=c_dir)
print(kb_dataset)
n=len(list_of_gpus) #nunber of dedicated GPUs
kb_list=[kb_dataset.shard(n, i, contiguous=True) for i in range(n)]
#kb_dataset.save_to_disk('/hpc/gsir059/MY-Test/RAY/transformers/examples/research_projects/rag/haha-dir')
print(self.trainer.global_rank)
dataset_shards = self.re_encode_kb(model_copy.to(device=list_of_gpus[self.trainer.global_rank]),kb_list[self.trainer.global_rank])
output = [None for _ in list_of_gpus]
#self.trainer.accelerator_connector.accelerator.barrier("embedding_process")
dist.all_gather_object(output, dataset_shards)
#This creation and re-initlaization of the new index
if (self.trainer.global_rank==0): #saving will be done in the main process
combined_dataset = concatenate_datasets(output)
passages_path =self.config.passages_path
logger.info("saving the dataset with ")
#combined_dataset.save_to_disk('/hpc/gsir059/MY-Test/RAY/transformers/examples/research_projects/rag/MY-Passage')
combined_dataset.save_to_disk(passages_path)
logger.info("Add faiss index to the dataset that consist of embeddings")
embedding_dataset=combined_dataset
index = faiss.IndexHNSWFlat(768, 128, faiss.METRIC_INNER_PRODUCT)
embedding_dataset.add_faiss_index("embeddings", custom_index=index)
embedding_dataset.get_index("embeddings").save(self.config.index_path)
|
CLOSED
| 2021-03-12T20:27:18
| 2021-03-24T22:29:11
| 2021-03-24T22:29:11
|
https://github.com/huggingface/datasets/issues/2046
|
shamanez
| 11
|
[] |
2,040
|
ValueError: datasets' indices [1] come from memory and datasets' indices [0] come from disk
|
Hi there,
I am trying to concat two datasets that I've previously saved to disk via `save_to_disk()` like so (note that both are saved as `DataDict`, `PATH_DATA_CLS_*` are `Path`-objects):
```python
concatenate_datasets([load_from_disk(PATH_DATA_CLS_A)['train'], load_from_disk(PATH_DATA_CLS_B)['train']])
```
Yielding the following error:
```python
ValueError: Datasets' indices should ALL come from memory, or should ALL come from disk.
However datasets' indices [1] come from memory and datasets' indices [0] come from disk.
```
Been trying to solve this for quite some time now. Both `DataDict` have been created by reading in a `csv` via `load_dataset` and subsequently processed using the various `datasets` methods (i.e. filter, map, remove col, rename col). Can't figure out tho...
`load_from_disk(PATH_DATA_CLS_A)['train']` yields:
```python
Dataset({
features: ['labels', 'text'],
num_rows: 785
})
```
`load_from_disk(PATH_DATA_CLS_B)['train']` yields:
```python
Dataset({
features: ['labels', 'text'],
num_rows: 3341
})
```
|
CLOSED
| 2021-03-12T14:27:00
| 2021-08-04T18:00:43
| 2021-08-04T18:00:43
|
https://github.com/huggingface/datasets/issues/2040
|
simonschoe
| 4
|
[] |
2,038
|
outdated dataset_infos.json might fail verifications
|
The [doc2dial/dataset_infos.json](https://github.com/huggingface/datasets/blob/master/datasets/doc2dial/dataset_infos.json) is outdated. It would fail data_loader when verifying download checksum etc..
Could you please update this file or point me how to update this file?
Thank you.
|
CLOSED
| 2021-03-12T11:41:54
| 2021-03-16T16:27:40
| 2021-03-16T16:27:40
|
https://github.com/huggingface/datasets/issues/2038
|
songfeng
| 2
|
[] |
2,036
|
Cannot load wikitext
|
when I execute these codes
```
>>> from datasets import load_dataset
>>> test_dataset = load_dataset("wikitext")
```
I got an error,any help?
```
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/xxx/anaconda3/envs/transformer/lib/python3.7/site-packages/datasets/load.py", line 589, in load_dataset
path, script_version=script_version, download_config=download_config, download_mode=download_mode, dataset=True
File "/home/xxx/anaconda3/envs/transformer/lib/python3.7/site-packages/datasets/load.py", line 267, in prepare_module
local_path = cached_path(file_path, download_config=download_config)
File "/home/xxx/anaconda3/envs/transformer/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 308, in cached_path
use_etag=download_config.use_etag,
File "/home/xxx/anaconda3/envs/transformer/lib/python3.7/site-packages/datasets/utils/file_utils.py", line 487, in get_from_cache
raise ConnectionError("Couldn't reach {}".format(url))
ConnectionError: Couldn't reach https://raw.githubusercontent.com/huggingface/datasets/1.1.3/datasets/wikitext/wikitext.py
```
|
CLOSED
| 2021-03-12T09:09:39
| 2021-03-15T08:45:02
| 2021-03-15T08:44:44
|
https://github.com/huggingface/datasets/issues/2036
|
Gpwner
| 1
|
[] |
2,035
|
wiki40b/wikipedia for almost all languages cannot be downloaded
|
Hi
I am trying to download the data as below:
```
from datasets import load_dataset
dataset = load_dataset("wiki40b", "cs")
print(dataset)
```
I am getting this error. @lhoestq I will be grateful if you could assist me with this error. For almost all languages except english I am getting this error.
I really need majority of languages in this dataset to be able to train my models for a deadline and your great scalable super well-written library is my only hope to train the models at scale while being low on resources.
thank you very much.
```
(fast) dara@vgne046:/user/dara/dev/codes/seq2seq$ python test_data.py
Downloading and preparing dataset wiki40b/cs (download: Unknown size, generated: Unknown size, post-processed: Unknown size, total: Unknown size) to temp/dara/cache_home_2/datasets/wiki40b/cs/1.1.0/063778187363ffb294896eaa010fc254b42b73e31117c71573a953b0b0bf010f...
Traceback (most recent call last):
File "test_data.py", line 3, in <module>
dataset = load_dataset("wiki40b", "cs")
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/load.py", line 746, in load_dataset
use_auth_token=use_auth_token,
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/builder.py", line 579, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/datasets/builder.py", line 1105, in _download_and_prepare
import apache_beam as beam
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/apache_beam-2.28.0-py3.7-linux-x86_64.egg/apache_beam/__init__.py", line 96, in <module>
from apache_beam import io
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/apache_beam-2.28.0-py3.7-linux-x86_64.egg/apache_beam/io/__init__.py", line 23, in <module>
from apache_beam.io.avroio import *
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/apache_beam-2.28.0-py3.7-linux-x86_64.egg/apache_beam/io/avroio.py", line 55, in <module>
import avro
File "<frozen importlib._bootstrap>", line 983, in _find_and_load
File "<frozen importlib._bootstrap>", line 967, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 668, in _load_unlocked
File "<frozen importlib._bootstrap>", line 638, in _load_backward_compatible
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/avro_python3-1.9.2.1-py3.7.egg/avro/__init__.py", line 34, in <module>
File "/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/avro_python3-1.9.2.1-py3.7.egg/avro/__init__.py", line 30, in LoadResource
NotADirectoryError: [Errno 20] Not a directory: '/user/dara/libs/anaconda3/envs/fast/lib/python3.7/site-packages/avro_python3-1.9.2.1-py3.7.egg/avro/VERSION.txt'
```
|
CLOSED
| 2021-03-11T19:54:54
| 2024-03-15T16:09:49
| 2024-03-15T16:09:48
|
https://github.com/huggingface/datasets/issues/2035
|
dorost1234
| 11
|
[] |
2,032
|
Use Arrow filtering instead of writing a new arrow file for Dataset.filter
|
Currently the filter method reads the dataset batch by batch to write a new, filtered, arrow file on disk. Therefore all the reading + writing can take some time.
Using a mask directly on the arrow table doesn't do any read or write operation therefore it's significantly quicker.
I think there are two cases:
- if the dataset doesn't have an indices mapping, then one can simply use the arrow filtering on the main arrow table `dataset._data.filter(...)`
- if the dataset an indices mapping, then the mask should be applied on the indices mapping table `dataset._indices.filter(...)`
The indices mapping is used to map between the idx at `dataset[idx]` in `__getitem__` and the idx in the actual arrow table.
The new filter method should therefore be faster, and allow users to pass either a filtering function (that returns a boolean given an example), or directly a mask.
Feel free to discuss this idea in this thread :)
One additional note: the refactor at #2025 would make all the pickle-related stuff work directly with the arrow filtering, so that we only need to change the Dataset.filter method without having to deal with pickle.
cc @theo-m @gchhablani
related issues: #1796 #1949
|
CLOSED
| 2021-03-11T15:18:50
| 2024-01-19T13:26:32
| 2024-01-19T13:26:32
|
https://github.com/huggingface/datasets/issues/2032
|
lhoestq
| 1
|
[
"enhancement"
] |
2,031
|
wikipedia.py generator that extracts XML doesn't release memory
|
I tried downloading Japanese wikipedia, but it always failed because of out of memory maybe.
I found that the generator function that extracts XML data in wikipedia.py doesn't release memory in the loop.
https://github.com/huggingface/datasets/blob/13a5b7db992ad5cf77895e4c0f76595314390418/datasets/wikipedia/wikipedia.py#L464-L502
`root.clear()` intend to clear memory, but it doesn't.
https://github.com/huggingface/datasets/blob/13a5b7db992ad5cf77895e4c0f76595314390418/datasets/wikipedia/wikipedia.py#L490
https://github.com/huggingface/datasets/blob/13a5b7db992ad5cf77895e4c0f76595314390418/datasets/wikipedia/wikipedia.py#L494
I replaced them with `elem.clear()`, then it seems to work correctly.
here is the notebook to reproduce it.
https://gist.github.com/miyamonz/dc06117302b6e85fa51cbf46dde6bb51#file-xtract_content-ipynb
|
CLOSED
| 2021-03-11T12:51:24
| 2021-03-22T08:33:52
| 2021-03-22T08:33:52
|
https://github.com/huggingface/datasets/issues/2031
|
miyamonz
| 2
|
[] |
2,029
|
Loading a faiss index KeyError
|
I've recently been testing out RAG and DPR embeddings, and I've run into an issue that is not apparent in the documentation.
The basic steps are:
1. Create a dataset (dataset1)
2. Create an embeddings column using DPR
3. Add a faiss index to the dataset
4. Save faiss index to a file
5. Create a new dataset (dataset2) with the same text and label information as dataset1
6. Try to load the faiss index from file to dataset2
7. Get `KeyError: "Column embeddings not in the dataset"`
I've made a colab notebook that should show exactly what I did. Please switch to GPU runtime; I didn't check on CPU.
https://colab.research.google.com/drive/1X0S9ZuZ8k0ybcoei4w7so6dS_WrABmIx?usp=sharing
Ubuntu Version
VERSION="18.04.5 LTS (Bionic Beaver)"
datasets==1.4.1
faiss==1.5.3
faiss-gpu==1.7.0
torch==1.8.0+cu101
transformers==4.3.3
NVIDIA-SMI 460.56
Driver Version: 460.32.03
CUDA Version: 11.2
Tesla K80
I was basically following the steps here: https://huggingface.co/docs/datasets/faiss_and_ea.html#adding-a-faiss-index
I included the exact code from the documentation at the end of the notebook to show that they don't work either.
|
CLOSED
| 2021-03-11T12:16:13
| 2021-03-12T00:21:09
| 2021-03-12T00:21:09
|
https://github.com/huggingface/datasets/issues/2029
|
nbroad1881
| 4
|
[
"documentation"
] |
2,026
|
KeyError on using map after renaming a column
|
Hi,
I'm trying to use `cifar10` dataset. I want to rename the `img` feature to `image` in order to make it consistent with `mnist`, which I'm also planning to use. By doing this, I was trying to avoid modifying `prepare_train_features` function.
Here is what I try:
```python
transform = Compose([ToPILImage(),ToTensor(),Normalize([0.0,0.0,0.0],[1.0,1.0,1.0])])
def prepare_features(examples):
images = []
labels = []
print(examples)
for example_idx, example in enumerate(examples["image"]):
if transform is not None:
images.append(transform(examples["image"][example_idx].permute(2,0,1)))
else:
images.append(examples["image"][example_idx].permute(2,0,1))
labels.append(examples["label"][example_idx])
output = {"label":labels, "image":images}
return output
raw_dataset = load_dataset('cifar10')
raw_dataset.set_format('torch',columns=['img','label'])
raw_dataset = raw_dataset.rename_column('img','image')
features = datasets.Features({
"image": datasets.Array3D(shape=(3,32,32),dtype="float32"),
"label": datasets.features.ClassLabel(names=[
"airplane",
"automobile",
"bird",
"cat",
"deer",
"dog",
"frog",
"horse",
"ship",
"truck",
]),
})
train_dataset = raw_dataset.map(prepare_features, features = features,batched=True, batch_size=10000)
```
The error:
```python
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
<ipython-input-54-bf29672c53ee> in <module>()
14 ]),
15 })
---> 16 train_dataset = raw_dataset.map(prepare_features, features = features,batched=True, batch_size=10000)
2 frames
/usr/local/lib/python3.7/dist-packages/datasets/arrow_dataset.py in map(self, function, with_indices, input_columns, batched, batch_size, drop_last_batch, remove_columns, keep_in_memory, load_from_cache_file, cache_file_name, writer_batch_size, features, disable_nullable, fn_kwargs, num_proc, suffix_template, new_fingerprint)
1287 test_inputs = self[:2] if batched else self[0]
1288 test_indices = [0, 1] if batched else 0
-> 1289 update_data = does_function_return_dict(test_inputs, test_indices)
1290 logger.info("Testing finished, running the mapping function on the dataset")
1291
/usr/local/lib/python3.7/dist-packages/datasets/arrow_dataset.py in does_function_return_dict(inputs, indices)
1258 fn_args = [inputs] if input_columns is None else [inputs[col] for col in input_columns]
1259 processed_inputs = (
-> 1260 function(*fn_args, indices, **fn_kwargs) if with_indices else function(*fn_args, **fn_kwargs)
1261 )
1262 does_return_dict = isinstance(processed_inputs, Mapping)
<ipython-input-52-b4dccbafb70d> in prepare_features(examples)
3 labels = []
4 print(examples)
----> 5 for example_idx, example in enumerate(examples["image"]):
6 if transform is not None:
7 images.append(transform(examples["image"][example_idx].permute(2,0,1)))
KeyError: 'image'
```
The print statement inside returns this:
```python
{'label': tensor([6, 9])}
```
Apparently, both `img` and `image` do not exist after renaming.
Note that this code works fine with `img` everywhere.
Notebook: https://colab.research.google.com/drive/1SzESAlz3BnVYrgQeJ838vbMp1OsukiA2?usp=sharing
|
CLOSED
| 2021-03-10T18:54:17
| 2021-03-11T14:39:34
| 2021-03-11T14:38:40
|
https://github.com/huggingface/datasets/issues/2026
|
gchhablani
| 3
|
[] |
2,022
|
ValueError when rename_column on splitted dataset
|
Hi there,
I am loading `.tsv` file via `load_dataset` and subsequently split the rows into training and test set via the `ReadInstruction` API like so:
```python
split = {
'train': ReadInstruction('train', to=90, unit='%'),
'test': ReadInstruction('train', from_=-10, unit='%')
}
dataset = load_dataset(
path='csv', # use 'text' loading script to load from local txt-files
delimiter='\t', # xxx
data_files=text_files, # list of paths to local text files
split=split, # xxx
)
dataset
```
Part of output:
```python
DatasetDict({
train: Dataset({
features: ['sentence', 'sentiment'],
num_rows: 900
})
test: Dataset({
features: ['sentence', 'sentiment'],
num_rows: 100
})
})
```
Afterwards I'd like to rename the 'sentence' column to 'text' in order to be compatible with my modelin pipeline. If I run the following code I experience a `ValueError` however:
```python
dataset['train'].rename_column('sentence', 'text')
```
```python
/usr/local/lib/python3.7/dist-packages/datasets/splits.py in __init__(self, name)
353 for split_name in split_names_from_instruction:
354 if not re.match(_split_re, split_name):
--> 355 raise ValueError(f"Split name should match '{_split_re}'' but got '{split_name}'.")
356
357 def __str__(self):
ValueError: Split name should match '^\w+(\.\w+)*$'' but got 'ReadInstruction('.
```
In particular, these behavior does not arise if I use the deprecated `rename_column_` method. Any idea what causes the error? Would assume something in the way I defined the split.
Thanks in advance! :)
|
CLOSED
| 2021-03-10T09:40:38
| 2025-02-05T13:36:07
| 2021-03-16T14:05:05
|
https://github.com/huggingface/datasets/issues/2022
|
simonschoe
| 2
|
[] |
2,021
|
Interactively doing save_to_disk and load_from_disk corrupts the datasets object?
|
dataset_info.json file saved after using save_to_disk gets corrupted as follows.
Is there a way to disable the cache that will save to /tmp/huggiface/datastes ?
I have a feeling there is a serious issue with cashing.
|
CLOSED
| 2021-03-10T02:48:34
| 2021-03-13T10:07:41
| 2021-03-13T10:07:41
|
https://github.com/huggingface/datasets/issues/2021
|
shamanez
| 1
|
[] |
2,012
|
No upstream branch
|
Feels like the documentation on adding a new dataset is outdated?
https://github.com/huggingface/datasets/blob/987df6b4e9e20fc0c92bc9df48137d170756fd7b/ADD_NEW_DATASET.md#L49-L54
There is no upstream branch on remote.
|
CLOSED
| 2021-03-09T09:48:55
| 2021-03-09T11:33:31
| 2021-03-09T11:33:31
|
https://github.com/huggingface/datasets/issues/2012
|
theo-m
| 2
|
[
"documentation"
] |
2,010
|
Local testing fails
|
I'm following the CI setup as described in
https://github.com/huggingface/datasets/blob/8eee4fa9e133fe873a7993ba746d32ca2b687551/.circleci/config.yml#L16-L19
in a new conda environment, at commit https://github.com/huggingface/datasets/commit/4de6dbf84e93dad97e1000120d6628c88954e5d4
and getting
```
FAILED tests/test_caching.py::RecurseDumpTest::test_dump_ipython_function - TypeError: an integer is required (got type bytes)
1 failed, 2321 passed, 5109 skipped, 10 warnings in 124.32s (0:02:04)
```
Seems like a discrepancy with CI, perhaps a lib version that's not controlled?
Tried with `pyarrow=={1.0.0,0.17.1,2.0.0}`
|
CLOSED
| 2021-03-09T09:01:38
| 2021-03-09T14:06:03
| 2021-03-09T14:06:03
|
https://github.com/huggingface/datasets/issues/2010
|
theo-m
| 3
|
[
"bug"
] |
2,009
|
Ambiguous documentation
|
https://github.com/huggingface/datasets/blob/2ac9a0d24a091989f869af55f9f6411b37ff5188/templates/new_dataset_script.py#L156-L158
Looking at the template, I find this documentation line to be confusing, the method parameters don't include the `gen_kwargs` so I'm unclear where they're coming from.
Happy to push a PR with a clearer statement when I understand the meaning.
|
CLOSED
| 2021-03-09T08:42:11
| 2021-03-12T15:01:34
| 2021-03-12T15:01:34
|
https://github.com/huggingface/datasets/issues/2009
|
theo-m
| 2
|
[
"documentation"
] |
2,007
|
How to not load huggingface datasets into memory
|
Hi
I am running this example from transformers library version 4.3.3:
(Here is the full documentation https://github.com/huggingface/transformers/issues/8771 but the running command should work out of the box)
USE_TF=0 deepspeed run_seq2seq.py --model_name_or_path google/mt5-base --dataset_name wmt16 --dataset_config_name ro-en --source_prefix "translate English to Romanian: " --task translation_en_to_ro --output_dir /test/test_large --do_train --do_eval --predict_with_generate --max_train_samples 500 --max_val_samples 500 --max_source_length 128 --max_target_length 128 --sortish_sampler --per_device_train_batch_size 8 --val_max_target_length 128 --deepspeed ds_config.json --num_train_epochs 1 --eval_steps 25000 --warmup_steps 500 --overwrite_output_dir
(Here please find the script: https://github.com/huggingface/transformers/blob/master/examples/seq2seq/run_seq2seq.py)
If you do not pass max_train_samples in above command to load the full dataset, then I get memory issue on a gpu with 24 GigBytes of memory.
I need to train large-scale mt5 model on large-scale datasets of wikipedia (multiple of them concatenated or other datasets in multiple languages like OPUS), could you help me how I can avoid loading the full data into memory? to make the scripts not related to data size?
In above example, I was hoping the script could work without relying on dataset size, so I can still train the model without subsampling training set.
thank you so much @lhoestq for your great help in advance
|
CLOSED
| 2021-03-08T12:35:26
| 2021-08-04T18:02:25
| 2021-08-04T18:02:25
|
https://github.com/huggingface/datasets/issues/2007
|
dorost1234
| 2
|
[] |
2,005
|
Setting to torch format not working with torchvision and MNIST
|
Hi
I am trying to use `torchvision.transforms` to handle the transformation of the image data in the `mnist` dataset. Assume I have a `transform` variable which contains the `torchvision.transforms` object.
A snippet of what I am trying to do:
```python
def prepare_features(examples):
images = []
labels = []
for example_idx, example in enumerate(examples["image"]):
if transform is not None:
images.append(transform(
np.array(examples["image"][example_idx], dtype=np.uint8)
))
else:
images.append(torch.tensor(np.array(examples["image"][example_idx], dtype=np.uint8)))
labels.append(torch.tensor(examples["label"][example_idx]))
output = {"label":labels, "image":images}
return output
raw_dataset = load_dataset('mnist')
train_dataset = raw_dataset.map(prepare_features, batched=True, batch_size=10000)
train_dataset.set_format("torch",columns=["image","label"])
```
After this, I check the type of the following:
```python
print(type(train_dataset["train"]["label"]))
print(type(train_dataset["train"]["image"][0]))
```
This leads to the following output:
```python
<class 'torch.Tensor'>
<class 'list'>
```
I use `torch.utils.DataLoader` for batches, the type of `batch["train"]["image"]` is also `<class 'list'>`.
I don't understand why only the `label` is converted to a torch tensor, why does the image not get converted? How can I fix this issue?
Thanks,
Gunjan
EDIT:
I just checked the shapes, and the types, `batch[image]` is a actually a list of list of tensors. Shape is (1,28,2,28), where `batch_size` is 2. I don't understand why this is happening. Ideally it should be a tensor of shape (2,1,28,28).
EDIT 2:
Inside `prepare_train_features`, the shape of `images[0]` is `torch.Size([1,28,28])`, the conversion is working. However, the output of the `map` is a list of list of list of list.
|
CLOSED
| 2021-03-08T07:38:11
| 2021-03-09T17:58:13
| 2021-03-09T17:58:13
|
https://github.com/huggingface/datasets/issues/2005
|
gchhablani
| 9
|
[] |
2,003
|
Messages are being printed to the `stdout`
|
In this code segment, we can see some messages are being printed to the `stdout`.
https://github.com/huggingface/datasets/blob/7e60bb509b595e8edc60a87f32b2bacfc065d607/src/datasets/builder.py#L545-L554
According to the comment, it is done intentionally, but I don't really understand why don't we log it with a higher level or print it directly to the `stderr`.
In my opinion, this kind of messages should never printed to the stdout. At least some configuration/flag should make it possible to provide in order to explicitly prevent the package to contaminate the stdout.
|
CLOSED
| 2021-03-07T22:09:34
| 2023-07-25T16:35:21
| 2023-07-25T16:35:21
|
https://github.com/huggingface/datasets/issues/2003
|
mahnerak
| 3
|
[] |
2,001
|
Empty evidence document ("provenance") in KILT ELI5 dataset
|
In the original KILT benchmark(https://github.com/facebookresearch/KILT),
all samples has its evidence document (i.e. wikipedia page id) for prediction.
For example, a sample in ELI5 dataset has the format including provenance (=evidence document) like this
`{"id": "1kiwfx", "input": "In Trading Places (1983, Akroyd/Murphy) how does the scheme at the end of the movie work? Why would buying a lot of OJ at a high price ruin the Duke Brothers?", "output": [{"answer": "I feel so old. People have been askinbg what happened at the end of this movie for what must be the last 15 years of my life. It never stops. Every year/month/fortnight, I see someone asking what happened, and someone explaining. Andf it will keep on happening, until I am 90yrs old, in a home, with nothing but the Internet and my bladder to keep me going. And there it will be: \"what happens at the end of Trading Places?\""}, {"provenance": [{"wikipedia_id": "242855", "title": "Futures contract", "section": "Section::::Abstract.", "start_paragraph_id": 1, "start_character": 14, "end_paragraph_id": 1, "end_character": 612, "bleu_score": 0.9232808519770748}]}], "meta": {"partial_evidence": [{"wikipedia_id": "520990", "title": "Trading Places", "section": "Section::::Plot.\n", "start_paragraph_id": 7, "end_paragraph_id": 7, "meta": {"evidence_span": ["On television, they learn that Clarence Beeks is transporting a secret USDA report on orange crop forecasts.", "On television, they learn that Clarence Beeks is transporting a secret USDA report on orange crop forecasts. Winthorpe and Valentine recall large payments made to Beeks by the Dukes and realize that the Dukes plan to obtain the report to corner the market on frozen orange juice.", "Winthorpe and Valentine recall large payments made to Beeks by the Dukes and realize that the Dukes plan to obtain the report to corner the market on frozen orange juice."]}}]}}`
However, KILT ELI5 dataset from huggingface datasets library only contain empty list of provenance.
`{'id': '1oy5tc', 'input': 'in football whats the point of wasting the first two plays with a rush - up the middle - not regular rush plays i get those', 'meta': {'left_context': '', 'mention': '', 'obj_surface': [], 'partial_evidence': [], 'right_context': '', 'sub_surface': [], 'subj_aliases': [], 'template_questions': []}, 'output': [{'answer': 'In most cases the O-Line is supposed to make a hole for the running back to go through. If you run too many plays to the outside/throws the defense will catch on.\n\nAlso, 2 5 yard plays gets you a new set of downs.', 'meta': {'score': 2}, 'provenance': []}, {'answer': "I you don't like those type of plays, watch CFL. We only get 3 downs so you can't afford to waste one. Lots more passing.", 'meta': {'score': 2}, 'provenance': []}]}
`
should i perform other procedure to obtain evidence documents?
|
CLOSED
| 2021-03-07T15:41:35
| 2022-12-19T19:25:14
| 2021-03-17T05:51:01
|
https://github.com/huggingface/datasets/issues/2001
|
donggyukimc
| 1
|
[] |
2,000
|
Windows Permission Error (most recent version of datasets)
|
Hi everyone,
Can anyone help me with why the dataset loading script below raises a Windows Permission Error? I stuck quite closely to https://github.com/huggingface/datasets/blob/master/datasets/conll2003/conll2003.py , only I want to load the data from three local three-column tsv-files (id\ttokens\tpos_tags\n). I am using the most recent version of datasets. Thank you in advance!
Luisa
My script:
```
import datasets
import csv
logger = datasets.logging.get_logger(__name__)
class SampleConfig(datasets.BuilderConfig):
def __init__(self, **kwargs):
super(SampleConfig, self).__init__(**kwargs)
class Sample(datasets.GeneratorBasedBuilder):
BUILDER_CONFIGS = [
SampleConfig(name="conll2003", version=datasets.Version("1.0.0"), description="Conll2003 dataset"),
]
def _info(self):
return datasets.DatasetInfo(
description="Dataset with words and their POS-Tags",
features=datasets.Features(
{
"id": datasets.Value("string"),
"tokens": datasets.Sequence(datasets.Value("string")),
"pos_tags": datasets.Sequence(
datasets.features.ClassLabel(
names=[
"''",
",",
"-LRB-",
"-RRB-",
".",
":",
"CC",
"CD",
"DT",
"EX",
"FW",
"HYPH",
"IN",
"JJ",
"JJR",
"JJS",
"MD",
"NN",
"NNP",
"NNPS",
"NNS",
"PDT",
"POS",
"PRP",
"PRP$",
"RB",
"RBR",
"RBS",
"RP",
"TO",
"UH",
"VB",
"VBD",
"VBG",
"VBN",
"VBP",
"VBZ",
"WDT",
"WP",
"WRB",
"``"
]
)
),
}
),
supervised_keys=None,
homepage="https://catalog.ldc.upenn.edu/LDC2011T03",
citation="Weischedel, Ralph, et al. OntoNotes Release 4.0 LDC2011T03. Web Download. Philadelphia: Linguistic Data Consortium, 2011.",
)
def _split_generators(self, dl_manager):
loaded_files = dl_manager.download_and_extract(self.config.data_files)
return [
datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"filepath": loaded_files["train"]}),
datasets.SplitGenerator(name=datasets.Split.TEST, gen_kwargs={"filepath": loaded_files["test"]}),
datasets.SplitGenerator(name=datasets.Split.VALIDATION, gen_kwargs={"filepath": loaded_files["val"]})
]
def _generate_examples(self, filepath):
logger.info("generating examples from = %s", filepath)
with open(filepath, encoding="cp1252") as f:
data = csv.reader(f, delimiter="\t")
ids = list()
tokens = list()
pos_tags = list()
for id_, line in enumerate(data):
#print(line)
if len(line) == 1:
if tokens:
yield id_, {"id": ids, "tokens": tokens, "pos_tags": pos_tags}
ids = list()
tokens = list()
pos_tags = list()
else:
ids.append(line[0])
tokens.append(line[1])
pos_tags.append(line[2])
# last example
yield id_, {"id": ids, "tokens": tokens, "pos_tags": pos_tags}
def main():
dataset = datasets.load_dataset(
"data_loading.py", data_files={
"train": "train.tsv",
"test": "test.tsv",
"val": "val.tsv"
}
)
#print(dataset)
if __name__=="__main__":
main()
```
|
CLOSED
| 2021-03-07T11:55:28
| 2021-03-09T12:42:57
| 2021-03-09T12:42:57
|
https://github.com/huggingface/datasets/issues/2000
|
itsLuisa
| 5
|
[] |
1,997
|
from datasets import MoleculeDataset, GEOMDataset
|
I met the ImportError: cannot import name 'MoleculeDataset' from 'datasets'. Have anyone met the similar issues? Thanks!
|
CLOSED
| 2021-03-06T15:50:19
| 2021-03-06T16:13:26
| 2021-03-06T16:13:26
|
https://github.com/huggingface/datasets/issues/1997
|
futianfan
| 0
|
[
"dataset request"
] |
1,996
|
Error when exploring `arabic_speech_corpus`
|
Navigate to https://huggingface.co/datasets/viewer/?dataset=arabic_speech_corpus
Error:
```
ImportError: To be able to use this dataset, you need to install the following dependencies['soundfile'] using 'pip install soundfile' for instance'
Traceback:
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/streamlit/script_runner.py", line 332, in _run_script
exec(code, module.__dict__)
File "/home/sasha/nlp-viewer/run.py", line 233, in <module>
configs = get_confs(option)
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/streamlit/caching.py", line 604, in wrapped_func
return get_or_create_cached_value()
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/streamlit/caching.py", line 588, in get_or_create_cached_value
return_value = func(*args, **kwargs)
File "/home/sasha/nlp-viewer/run.py", line 145, in get_confs
module_path = nlp.load.prepare_module(path, dataset=True
File "/home/sasha/.local/share/virtualenvs/lib-ogGKnCK_/lib/python3.7/site-packages/datasets/load.py", line 342, in prepare_module
f"To be able to use this {module_type}, you need to install the following dependencies"
```
|
CLOSED
| 2021-03-06T05:55:20
| 2022-10-05T13:24:26
| 2022-10-05T13:24:26
|
https://github.com/huggingface/datasets/issues/1996
|
elgeish
| 3
|
[
"bug",
"nlp-viewer",
"speech"
] |
1,994
|
not being able to get wikipedia es language
|
Hi
I am trying to run a code with wikipedia of config 20200501.es, getting:
Traceback (most recent call last):
File "run_mlm_t5.py", line 608, in <module>
main()
File "run_mlm_t5.py", line 359, in main
datasets = load_dataset(data_args.dataset_name, data_args.dataset_config_name)
File "/dara/libs/anaconda3/envs/success432/lib/python3.7/site-packages/datasets-1.2.1-py3.7.egg/datasets/load.py", line 612, in load_dataset
ignore_verifications=ignore_verifications,
File "/dara/libs/anaconda3/envs/success432/lib/python3.7/site-packages/datasets-1.2.1-py3.7.egg/datasets/builder.py", line 527, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/dara/libs/anaconda3/envs/success432/lib/python3.7/site-packages/datasets-1.2.1-py3.7.egg/datasets/builder.py", line 1050, in _download_and_prepare
"\n\t`{}`".format(usage_example)
datasets.builder.MissingBeamOptions: Trying to generate a dataset using Apache Beam, yet no Beam Runner or PipelineOptions() has been provided in `load_dataset` or in the builder arguments. For big datasets it has to run on large-scale data processing tools like Dataflow, Spark, etc. More information about Apache Beam runners at https://beam.apache.org/documentation/runners/capability-matrix/
If you really want to run it locally because you feel like the Dataset is small enough, you can use the local beam runner called `DirectRunner` (you may run out of memory).
Example of usage:
`load_dataset('wikipedia', '20200501.es', beam_runner='DirectRunner')`
thanks @lhoestq for any suggestion/help
|
OPEN
| 2021-03-05T08:31:48
| 2021-03-11T20:46:21
| null |
https://github.com/huggingface/datasets/issues/1994
|
dorost1234
| 8
|
[] |
1,993
|
How to load a dataset with load_from disk and save it again after doing transformations without changing the original?
|
I am using the latest datasets library. In my work, I first use **load_from_disk** to load a data set that contains 3.8Gb information. Then during my training process, I update that dataset object and add new elements and save it in a different place.
When I save the dataset with **save_to_disk**, the original dataset which is already in the disk also gets updated. I do not want to update it. How to prevent from this?
|
CLOSED
| 2021-03-05T05:25:50
| 2021-03-22T04:05:50
| 2021-03-22T04:05:50
|
https://github.com/huggingface/datasets/issues/1993
|
shamanez
| 7
|
[] |
1,992
|
`datasets.map` multi processing much slower than single processing
|
Hi, thank you for the great library.
I've been using datasets to pretrain language models, and it often involves datasets as large as ~70G.
My data preparation step is roughly two steps: `load_dataset` which splits corpora into a table of sentences, and `map` converts a sentence into a list of integers, using a tokenizer.
I noticed that `map` function with `num_proc=mp.cpu_count() //2` takes more than 20 hours to finish the job where as `num_proc=1` gets the job done in about 5 hours. The machine I used has 40 cores, with 126G of RAM. There were no other jobs when `map` function was running.
What could be the reason? I would be happy to provide information necessary to spot the reason.
p.s. I was experiencing the imbalance issue mentioned in [here](https://github.com/huggingface/datasets/issues/610#issuecomment-705177036) when I was using multi processing.
p.s.2 When I run `map` with `num_proc=1`, I see one tqdm bar but all the cores are working. When `num_proc=20`, only 20 cores work.
|
OPEN
| 2021-03-05T02:10:02
| 2024-06-08T20:18:03
| null |
https://github.com/huggingface/datasets/issues/1992
|
hwijeen
| 14
|
[
"bug"
] |
1,990
|
OSError: Memory mapping file failed: Cannot allocate memory
|
Hi,
I am trying to run a code with a wikipedia dataset, here is the command to reproduce the error. You can find the codes for run_mlm.py in huggingface repo here: https://github.com/huggingface/transformers/blob/v4.3.2/examples/language-modeling/run_mlm.py
```
python run_mlm.py --model_name_or_path bert-base-multilingual-cased --dataset_name wikipedia --dataset_config_name 20200501.en --do_train --do_eval --output_dir /dara/test --max_seq_length 128
```
I am using transformer version: 4.3.2
But I got memory erorr using this dataset, is there a way I could save on memory with dataset library with wikipedia dataset?
Specially I need to train a model with multiple of wikipedia datasets concatenated. thank you very much @lhoestq for your help and suggestions:
```
File "run_mlm.py", line 441, in <module>
main()
File "run_mlm.py", line 233, in main
split=f"train[{data_args.validation_split_percentage}%:]",
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/load.py", line 750, in load_dataset
ds = builder_instance.as_dataset(split=split, ignore_verifications=ignore_verifications, in_memory=keep_in_memory)
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/builder.py", line 740, in as_dataset
map_tuple=True,
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/utils/py_utils.py", line 225, in map_nested
return function(data_struct)
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/builder.py", line 757, in _build_single_dataset
in_memory=in_memory,
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/builder.py", line 829, in _as_dataset
in_memory=in_memory,
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/arrow_reader.py", line 215, in read
return self.read_files(files=files, original_instructions=instructions, in_memory=in_memory)
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/arrow_reader.py", line 236, in read_files
pa_table = self._read_files(files, in_memory=in_memory)
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/arrow_reader.py", line 171, in _read_files
pa_table: pa.Table = self._get_dataset_from_filename(f_dict, in_memory=in_memory)
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/arrow_reader.py", line 302, in _get_dataset_from_filename
pa_table = ArrowReader.read_table(filename, in_memory=in_memory)
File "/dara/libs/anaconda3/envs/code/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/arrow_reader.py", line 322, in read_table
stream = stream_from(filename)
File "pyarrow/io.pxi", line 782, in pyarrow.lib.memory_map
File "pyarrow/io.pxi", line 743, in pyarrow.lib.MemoryMappedFile._open
File "pyarrow/error.pxi", line 122, in pyarrow.lib.pyarrow_internal_check_status
File "pyarrow/error.pxi", line 99, in pyarrow.lib.check_status
OSError: Memory mapping file failed: Cannot allocate memory
```
|
CLOSED
| 2021-03-04T18:21:58
| 2021-08-04T18:04:25
| 2021-08-04T18:04:25
|
https://github.com/huggingface/datasets/issues/1990
|
dorost1234
| 6
|
[] |
1,989
|
Question/problem with dataset labels
|
Hi, I'm using a dataset with two labels "nurse" and "not nurse". For whatever reason (that I don't understand), I get an error that I think comes from the datasets package (using csv). Everything works fine if the labels are "nurse" and "surgeon".
This is the trace I get:
```
File "../../../models/tr-4.3.2/run_puppets.py", line 523, in <module>
main()
File "../../../models/tr-4.3.2/run_puppets.py", line 249, in main
datasets = load_dataset("csv", data_files=data_files)
File "/dccstor/redrug_ier/envs/last-tr/lib/python3.8/site-packages/datasets/load.py", line 740, in load_dataset
builder_instance.download_and_prepare(
File "/dccstor/redrug_ier/envs/last-tr/lib/python3.8/site-packages/datasets/builder.py", line 572, in download_and_prepare
self._download_and_prepare(
File "/dccstor/redrug_ier/envs/last-tr/lib/python3.8/site-packages/datasets/builder.py", line 650, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/dccstor/redrug_ier/envs/last-tr/lib/python3.8/site-packages/datasets/builder.py", line 1028, in _prepare_split
writer.write_table(table)
File "/dccstor/redrug_ier/envs/last-tr/lib/python3.8/site-packages/datasets/arrow_writer.py", line 292, in write_table
pa_table = pa_table.cast(self._schema)
File "pyarrow/table.pxi", line 1311, in pyarrow.lib.Table.cast
File "pyarrow/table.pxi", line 265, in pyarrow.lib.ChunkedArray.cast
File "/dccstor/redrug_ier/envs/last-tr/lib/python3.8/site-packages/pyarrow/compute.py", line 87, in cast
return call_function("cast", [arr], options)
File "pyarrow/_compute.pyx", line 298, in pyarrow._compute.call_function
File "pyarrow/_compute.pyx", line 192, in pyarrow._compute.Function.call
File "pyarrow/error.pxi", line 122, in pyarrow.lib.pyarrow_internal_check_status
File "pyarrow/error.pxi", line 84, in pyarrow.lib.check_status
pyarrow.lib.ArrowInvalid: Failed to parse string: not nurse
```
Any ideas how to fix this? For now, I'll probably make them numeric.
|
CLOSED
| 2021-03-04T17:06:53
| 2023-07-24T14:39:33
| 2023-07-24T14:39:33
|
https://github.com/huggingface/datasets/issues/1989
|
ioana-blue
| 10
|
[] |
1,988
|
Readme.md is misleading about kinds of datasets?
|
Hi!
At the README.MD, you say: "efficient data pre-processing: simple, fast and reproducible data pre-processing for the above public datasets as well as your own local datasets in CSV/JSON/text. "
But here:
https://github.com/huggingface/datasets/blob/master/templates/new_dataset_script.py#L82-L117
You mention other kinds of datasets, with images and so on. I'm confused.
Is it possible to use it to store, say, imagenet locally?
|
CLOSED
| 2021-03-04T17:04:20
| 2021-08-04T18:05:23
| 2021-08-04T18:05:23
|
https://github.com/huggingface/datasets/issues/1988
|
surak
| 1
|
[] |
1,987
|
wmt15 is broken
|
While testing the hotfix, I tried a random other wmt release and found wmt15 to be broken:
```
python -c 'from datasets import load_dataset; load_dataset("wmt15", "de-en")'
Downloading: 2.91kB [00:00, 818kB/s]
Downloading: 3.02kB [00:00, 897kB/s]
Downloading: 41.1kB [00:00, 19.1MB/s]
Downloading and preparing dataset wmt15/de-en (download: Unknown size, generated: Unknown size, post-processed: Unknown size, total: Unknown size) to /home/stas/.cache/huggingface/datasets/wmt15/de-en/1.0.0/39ad5f9262a0910a8ad7028ad432731ad23fdf91f2cebbbf2ba4776b9859e87f...
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/load.py", line 740, in load_dataset
builder_instance.download_and_prepare(
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/builder.py", line 578, in download_and_prepare
self._download_and_prepare(
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/builder.py", line 634, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File "/home/stas/.cache/huggingface/modules/datasets_modules/datasets/wmt15/39ad5f9262a0910a8ad7028ad432731ad23fdf91f2cebbbf2ba4776b9859e87f/wmt_utils.py", line 757, in _split_generators
downloaded_files = dl_manager.download_and_extract(urls_to_download)
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/download_manager.py", line 283, in download_and_extract
return self.extract(self.download(url_or_urls))
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/download_manager.py", line 191, in download
downloaded_path_or_paths = map_nested(
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/py_utils.py", line 203, in map_nested
mapped = [
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/py_utils.py", line 204, in <listcomp>
_single_map_nested((function, obj, types, None, True)) for obj in tqdm(iterable, disable=disable_tqdm)
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/py_utils.py", line 160, in _single_map_nested
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/py_utils.py", line 160, in <listcomp>
mapped = [_single_map_nested((function, v, types, None, True)) for v in pbar]
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/py_utils.py", line 142, in _single_map_nested
return function(data_struct)
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/download_manager.py", line 214, in _download
return cached_path(url_or_filename, download_config=download_config)
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/file_utils.py", line 274, in cached_path
output_path = get_from_cache(
File "/home/stas/anaconda3/envs/main-38/lib/python3.8/site-packages/datasets/utils/file_utils.py", line 614, in get_from_cache
raise FileNotFoundError("Couldn't find file at {}".format(url))
FileNotFoundError: Couldn't find file at https://huggingface.co/datasets/wmt/wmt15/resolve/main/training-parallel-nc-v10.tgz
```
|
CLOSED
| 2021-03-04T16:46:25
| 2022-10-05T13:12:26
| 2022-10-05T13:12:26
|
https://github.com/huggingface/datasets/issues/1987
|
stas00
| 1
|
[] |
1,986
|
wmt datasets fail to load
|
~\.cache\huggingface\modules\datasets_modules\datasets\wmt14\43e717d978d2261502b0194999583acb874ba73b0f4aed0ada2889d1bb00f36e\wmt_utils.py in _split_generators(self, dl_manager)
758 # Extract manually downloaded files.
759 manual_files = dl_manager.extract(manual_paths_dict)
--> 760 extraction_map = dict(downloaded_files, **manual_files)
761
762 for language in self.config.language_pair:
TypeError: type object argument after ** must be a mapping, not list
|
CLOSED
| 2021-03-04T14:18:55
| 2021-03-04T14:31:07
| 2021-03-04T14:31:07
|
https://github.com/huggingface/datasets/issues/1986
|
sabania
| 1
|
[] |
1,984
|
Add tests for WMT datasets
|
As requested in #1981, we need tests for WMT datasets, using dummy data.
|
CLOSED
| 2021-03-04T06:46:42
| 2022-11-04T14:19:16
| 2022-11-04T14:19:16
|
https://github.com/huggingface/datasets/issues/1984
|
albertvillanova
| 1
|
[] |
1,983
|
The size of CoNLL-2003 is not consistant with the official release.
|
Thanks for the dataset sharing! But when I use conll-2003, I meet some questions.
The statistics of conll-2003 in this repo is :
\#train 14041 \#dev 3250 \#test 3453
While the official statistics is:
\#train 14987 \#dev 3466 \#test 3684
Wish for your reply~
|
CLOSED
| 2021-03-04T04:41:34
| 2022-10-05T13:13:26
| 2022-10-05T13:13:26
|
https://github.com/huggingface/datasets/issues/1983
|
h-peng17
| 4
|
[] |
1,981
|
wmt datasets fail to load
|
on master:
```
python -c 'from datasets import load_dataset; load_dataset("wmt14", "de-en")'
Downloading and preparing dataset wmt14/de-en (download: Unknown size, generated: Unknown size, post-processed: Unknown size, total: Unknown size) to /home/stas/.cache/huggingface/datasets/wmt14/de-en/1.0.0/43e717d978d2261502b0194999583acb874ba73b0f4aed0ada2889d1bb00f36e...
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/mnt/nvme1/code/huggingface/datasets-master/src/datasets/load.py", line 740, in load_dataset
builder_instance.download_and_prepare(
File "/mnt/nvme1/code/huggingface/datasets-master/src/datasets/builder.py", line 578, in download_and_prepare
self._download_and_prepare(
File "/mnt/nvme1/code/huggingface/datasets-master/src/datasets/builder.py", line 634, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File "/home/stas/.cache/huggingface/modules/datasets_modules/datasets/wmt14/43e717d978d2261502b0194999583acb874ba73b0f4aed0ada2889d1bb00f36e/wmt_utils.py", line 760, in _split_generators
extraction_map = dict(downloaded_files, **manual_files)
```
it worked fine recently. same problem if I try wmt16.
git bisect points to this commit from Feb 25 as the culprit https://github.com/huggingface/datasets/commit/792f1d9bb1c5361908f73e2ef7f0181b2be409fa
@albertvillanova
|
CLOSED
| 2021-03-03T19:21:39
| 2021-03-04T14:16:47
| 2021-03-03T22:48:36
|
https://github.com/huggingface/datasets/issues/1981
|
stas00
| 6
|
[] |
1,977
|
ModuleNotFoundError: No module named 'apache_beam' for wikipedia datasets
|
Hi
I am trying to run run_mlm.py code [1] of huggingface with following "wikipedia"/ "20200501.aa" dataset:
`python run_mlm.py --model_name_or_path bert-base-multilingual-cased --dataset_name wikipedia --dataset_config_name 20200501.aa --do_train --do_eval --output_dir /tmp/test-mlm --max_seq_length 256
`
I am getting this error, but as per documentation, huggingface dataset provide processed version of this dataset and users can load it without requiring setup extra settings for apache-beam. could you help me please to load this dataset?
Do you think I can run run_ml.py with this dataset? or anyway I could subsample and train the model? I greatly appreciate providing the processed version of all languages for this dataset, which allow the user to use them without setting up apache-beam,. thanks
I really appreciate your help.
@lhoestq
thanks.
[1] https://github.com/huggingface/transformers/blob/master/examples/language-modeling/run_mlm.py
error I get:
```
>>> import datasets
>>> datasets.load_dataset("wikipedia", "20200501.aa")
Downloading and preparing dataset wikipedia/20200501.aa (download: Unknown size, generated: Unknown size, post-processed: Unknown size, total: Unknown size) to /dara/temp/cache_home_2/datasets/wikipedia/20200501.aa/1.0.0/4021357e28509391eab2f8300d9b689e7e8f3a877ebb3d354b01577d497ebc63...
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/dara/temp/libs/anaconda3/envs/codes/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/load.py", line 746, in load_dataset
use_auth_token=use_auth_token,
File "/dara/temp/libs/anaconda3/envs/codes/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/builder.py", line 573, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/dara/temp/libs/anaconda3/envs/codes/lib/python3.7/site-packages/datasets-1.3.0-py3.7.egg/datasets/builder.py", line 1099, in _download_and_prepare
import apache_beam as beam
ModuleNotFoundError: No module named 'apache_beam'
```
|
OPEN
| 2021-03-02T19:21:28
| 2021-03-03T10:17:40
| null |
https://github.com/huggingface/datasets/issues/1977
|
dorost1234
| 2
|
[] |
1,973
|
Question: what gets stored in the datasets cache and why is it so huge?
|
I'm running several training jobs (around 10) with a relatively large dataset (3M samples). The datasets cache reached 178G and it seems really large. What is it stored in there and why is it so large? I don't think I noticed this problem before and seems to be related to the new version of the datasets library. Any insight? Thank you!
|
CLOSED
| 2021-03-02T14:35:53
| 2021-03-30T14:03:59
| 2021-03-16T09:44:00
|
https://github.com/huggingface/datasets/issues/1973
|
ioana-blue
| 8
|
[] |
1,972
|
'Dataset' object has no attribute 'rename_column'
|
'Dataset' object has no attribute 'rename_column'
|
CLOSED
| 2021-03-02T08:01:49
| 2022-06-01T16:08:47
| 2022-06-01T16:08:47
|
https://github.com/huggingface/datasets/issues/1972
|
farooqzaman1
| 1
|
[] |
1,965
|
Can we parallelized the add_faiss_index process over dataset shards ?
|
I am thinking of making the **add_faiss_index** process faster. What if we run the add_faiss_index process on separate dataset shards and then combine them before (dataset.concatenate) saving the faiss.index file ?
I feel theoretically this will reduce the accuracy of retrieval since it affects the indexing process.
@lhoestq
|
CLOSED
| 2021-03-01T12:47:34
| 2021-03-04T19:40:56
| 2021-03-04T19:40:42
|
https://github.com/huggingface/datasets/issues/1965
|
shamanez
| 3
|
[] |
1,964
|
Datasets.py function load_dataset does not match squad dataset
|
### 1 When I try to train lxmert,and follow the code in README that --dataset name:
```shell
python examples/question-answering/run_qa.py --model_name_or_path unc-nlp/lxmert-base-uncased --dataset_name squad --do_train --do_eval --per_device_train_batch_size 12 --learning_rate 3e-5 --num_train_epochs 2 --max_seq_length 384 --doc_stride 128 --output_dir /home2/zhenggo1/checkpoint/lxmert_squad
```
the bug is that:
```
Downloading and preparing dataset squad/plain_text (download: 33.51 MiB, generated: 85.75 MiB, post-processed: Unknown size, total: 119.27 MiB) to /home2/zhenggo1/.cache/huggingface/datasets/squad/plain_text/1.0.0/4c81550d83a2ac7c7ce23783bd8ff36642800e6633c1f18417fb58c3ff50cdd7...
Traceback (most recent call last):
File "examples/question-answering/run_qa.py", line 501, in <module>
main()
File "examples/question-answering/run_qa.py", line 217, in main
datasets = load_dataset(data_args.dataset_name, data_args.dataset_config_name)
File "/home2/zhenggo1/anaconda3/envs/lpot/lib/python3.7/site-packages/datasets/load.py", line 746, in load_dataset
use_auth_token=use_auth_token,
File "/home2/zhenggo1/anaconda3/envs/lpot/lib/python3.7/site-packages/datasets/builder.py", line 573, in download_and_prepare
dl_manager=dl_manager, verify_infos=verify_infos, **download_and_prepare_kwargs
File "/home2/zhenggo1/anaconda3/envs/lpot/lib/python3.7/site-packages/datasets/builder.py", line 633, in _download_and_prepare
self.info.download_checksums, dl_manager.get_recorded_sizes_checksums(), "dataset source files"
File "/home2/zhenggo1/anaconda3/envs/lpot/lib/python3.7/site-packages/datasets/utils/info_utils.py", line 39, in verify_checksums
raise NonMatchingChecksumError(error_msg + str(bad_urls))
datasets.utils.info_utils.NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://rajpurkar.github.io/SQuAD-explorer/dataset/train-v1.1.json']
```
And I try to find the [checksum link](https://github.com/huggingface/datasets/blob/master/datasets/squad/dataset_infos.json)
,is the problem plain_text do not have a checksum?
### 2 When I try to train lxmert,and use local dataset:
```
python examples/question-answering/run_qa.py --model_name_or_path unc-nlp/lxmert-base-uncased --train_file $SQUAD_DIR/train-v1.1.json --validation_file $SQUAD_DIR/dev-v1.1.json --do_train --do_eval --per_device_train_batch_size 12 --learning_rate 3e-5 --num_train_epochs 2 --max_seq_length 384 --doc_stride 128 --output_dir /home2/zhenggo1/checkpoint/lxmert_squad
```
The bug is that
```
['title', 'paragraphs']
Traceback (most recent call last):
File "examples/question-answering/run_qa.py", line 501, in <module>
main()
File "examples/question-answering/run_qa.py", line 273, in main
answer_column_name = "answers" if "answers" in column_names else column_names[2]
IndexError: list index out of range
```
I print the answer_column_name and find that local squad dataset need the package datasets to preprocessing so that the code below can work:
```
if training_args.do_train:
column_names = datasets["train"].column_names
else:
column_names = datasets["validation"].column_names
print(datasets["train"].column_names)
question_column_name = "question" if "question" in column_names else column_names[0]
context_column_name = "context" if "context" in column_names else column_names[1]
answer_column_name = "answers" if "answers" in column_names else column_names[2]
```
## Please tell me how to fix the bug,thks a lot!
|
CLOSED
| 2021-03-01T08:41:31
| 2022-10-05T13:09:47
| 2022-10-05T13:09:47
|
https://github.com/huggingface/datasets/issues/1964
|
LeopoldACC
| 6
|
[] |
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