|
|
--- |
|
|
dataset_info: |
|
|
features: |
|
|
- name: IdA |
|
|
dtype: string |
|
|
- name: IdB |
|
|
dtype: string |
|
|
- name: labels |
|
|
dtype: float64 |
|
|
- name: mechanism |
|
|
dtype: string |
|
|
- name: effect |
|
|
dtype: string |
|
|
- name: score |
|
|
dtype: float64 |
|
|
- name: sentence |
|
|
dtype: string |
|
|
- name: signor_id |
|
|
dtype: string |
|
|
splits: |
|
|
- name: train |
|
|
num_bytes: 12875889 |
|
|
num_examples: 31474 |
|
|
download_size: 4977813 |
|
|
dataset_size: 12875889 |
|
|
configs: |
|
|
- config_name: default |
|
|
data_files: |
|
|
- split: train |
|
|
path: data/train-* |
|
|
--- |
|
|
|
|
|
Downloaded from SIGNOR 4.0 on 2/4/2026: https://signor.uniroma2.it/downloads.php |
|
|
|
|
|
Used the Complete Dataset for Homo sapiens |
|
|
|
|
|
- Filtered to entries where TYPEA=='protein' and TYPEB=='protein' |
|
|
- Filtered to entries where DIRECT=='YES' |
|
|
- Dropped entries where EFFECT=='uknown' |
|
|
- Dropped a single entry where EFFECT=='form complex' |
|
|
- Filtered to only include the shown columns (renamed) |
|
|
- Dropped duplicates |
|
|
|
|
|
Assigned a label of 2 to entries whose EFFECT was 'binding', as well as entries for which the invert appeared (If IDA=X and IDB=Y, when the inverse exists in the dataset, those get a label of 2) |
|
|
|
|
|
The rest of the entries received a label of 1. The IDs for those entries were then inverted and added to the dataset. The inverted pairs received a label of 0. |