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Update README.md 7396516 verified
potential fix for torch import error 89a4f79
Erva Ulusoy commited on
fix env building error 589e75e
Erva Ulusoy commited on
fix to avoid overwriting graph edges during inference + add prediction generation threshold 23f3d8f
Erva Ulusoy commited on
updated info message on visualization page cdefd25
Erva Ulusoy commited on
added filtering options for second-degree edge visualization a1e2231
Erva Ulusoy commited on
include second degree edges (major update) 14c3500
Erva Ulusoy commited on
color the edge and node titles based on type 85b27f1
Erva Ulusoy commited on
updated labels of edge colors in legend b42cc3c
Erva Ulusoy commited on
edge title fix 297cd76
Erva Ulusoy commited on
updated node titles to contain node name instead of id e0fbc94
Erva Ulusoy commited on
updated node name info file to include node types other than protein and go 9fb2870
Erva Ulusoy commited on
updated embedded node information 5cb58d3
Erva Ulusoy commited on
updated legend layout 31935f9
Erva Ulusoy commited on
added legend for kg visualization f465b10
Erva Ulusoy commited on
updated edge coloring, modified edge labels to more clear ones 67e78f6
Erva Ulusoy commited on
added coloring to predicted/ground truth go term edges 51641fb
Erva Ulusoy commited on
added kg visualization feature 8f4b741
Erva Ulusoy commited on
color generate predictions button red dbed3d3
adjust generate predictions button placement 9e796bc
changed workflow pdf to png it was not working 1d133b0
Erva Ulusoy commited on
delete availanle_proteins.txt as it is no longer necessary 0d1479e
Erva Ulusoy commited on
Update User_Guide.py 3f53680
Erva Ulusoy commited on
added hyperlinks to uniprot and go ids 9a145bd
Erva Ulusoy commited on
included protein and go term names in the result df 988f84d
Erva Ulusoy commited on
enable sidebar fix 42e2260
Erva Ulusoy commited on
update ProtHGT_app.py b2ca546
Erva Ulusoy commited on
fix sidebar enable/disable 8b87470
Erva Ulusoy commited on
enable sidebar after predictions are made e021e3c
Erva Ulusoy commited on
show selected proteins when using example query e8c701e
make multiselect box scrollable and discard view selected proteins container to only keep download button eb75910
better explain search process 2643ed2
explain the usage of search proteins menu 25123c8
Erva Ulusoy commited on
removed redundant button 1e273b2
Erva Ulusoy commited on
new function to disable sidebar when generating predictions fb8112c
Erva Ulusoy commited on
when generating predictions disable the sidebar abddf21
Erva Ulusoy commited on
Update ProtHGT_app.py 95173ca
Erva Ulusoy commited on
make protein id search matching case insensitive fcbba9e
Erva Ulusoy commited on
fix example proteins bug a38fdcd
Erva Ulusoy commited on
make random choice of example proteins constant for each session 210eeb2
Erva Ulusoy commited on
disable generate predictions button when there are no new inputs 0ee926e
Erva Ulusoy commited on
discard the manual reset button 2f8d670
Erva Ulusoy commited on
removed unnecessary code snippet 94db867
added example query option 7419d2a
Erva Ulusoy commited on
added fuzzy search feature da1c3d0
Erva Ulusoy commited on
added new future work point 867722f
Erva Ulusoy commited on
Update requirements.txt 4190d38
Erva Ulusoy commited on
updated requirements 3e01b83
Erva Ulusoy commited on
fix data load bug 0711e04
Erva Ulusoy commited on